Transcript Information: S_Transcript_11805.p1


Annotated TAIR IDAT5G41790.1
Annotated Gene NameCOP1-interactive protein 1
Annotated Gene Symbol(s)CIP1
Annotation TypeHomolog
Chromosome Positionchr5:16727530-16732391 | Forward length=1586
E-Value8E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.136363141169
Replicate 28.1019652092846
Replicate 38.4237686815839
Condition 2: 8 Hour
Replicate 19.5786275172555
Replicate 27.8759770628476
Replicate 39.1538465435656
Condition 3: 24 Hour
Replicate 18.2871333424105
Replicate 27.944370977445
Replicate 38.2670130371853


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11805.p1 GENE.S_Transcript_11805~~S_Transcript_11805.p1 ORF type:complete len:659 (+),score=177.09 S_Transcript_11805:153-1979(+)
ATGAACTCAAATTCTTCCAGTCGTTCATCACCAAGCCGCCCAATCTCCGACATAATCTCAGCCCTAAAATCCTCATTTCGTGAAACCGATTTCAGACAAGCCATCAAAGACTTGGAATTCAGAGAGTCGAAATTGATCAAAGACAAGGTCCAGAATTGGCACGAAAAGCACCACATTTTAGAGGGTGATTATCGCCAATTACAGATTAAGGTGGTAGAATTGGAGAATGAACTGCATTGTGTAAGGAGGGAACGTGAAATTAGTGCCAATCTATTGAGCGATTCTACTAGGGATTTGAGTGTGGTGAAGGAGAGAGAGGAGAAGGCTATAAAAAGGTATGACAAGTTGATTATTGATTTTAGGGAAACTGAGAGACGCAAGTTGAAATTGAATGGGGAGTTGGATGAACTGAGAGAAGATAACAAATACAAGGACGAGAGGATCAAGGAATTGGTGAAGAAATTGGAAGAACAAAAAAGGATTGCAAGGGATGATGATGGTGAGAAGAAGGTTGATGAATTGATGAGGAAAATTAGGGTTTTGGAGATGGAGAATTCGGAGCTTTTAAAGAGTAATGAAGTTTTAGAAAGGGGTAAAGATGAAGCTGTTGTGAGGTACAAGGAGATGATGGACAAAATTTGTGTTTTGGAGATGGAGAATTCGGAACTTTTGAAGAGTAATGCAGGTTTAGAAAGGGTTAAACATGAAGCAATTGCGAGGTGTGAGGAGATGATAGAGAAAACTAGGGTTTTGGAGAATCAAGTTGTGGAGCTTGAAAGGGAAAATGAAACTTTGGAAGAAGAGGAAATGAGAATAGTAAGGGAAAAAGGGGAGAAGATCGAGGAACTGATGAAGAAAATTAGGGTTTTGGAGATGGAGAATTCGGAGCTTTTGAAGAGTAATGCAGGTTTCGAAAGGGATAAAAGGGAAGCGAGTGCAAGGTATGAGGAGATGATGAAGAAAGTTAGGGTTTTGGAGGATCAGGTTGAGGAGATTGGAAGAGAAGATGAGAAAATTCAGCAAATGACAAAGGAAAATGAGGAGATGGTGGCAAAAATTCGGTGTTTGGAGGCGGAGAAGAGACAACTGTCTGAGAAAAATGAGGAGTTAATCAAATATAAGAACGAAGCAATAGCAAAGAATGAGCAAATGGAGAAGCAGGTTATGAAGCTGGAGGAAGATGTTGTGGGATTGCTGCCCTTGAATGTGGCAAGGGATAGAAATTCTCTAAATACCCATTTAGAAAAGATCTTTGAAGCTATTTGTTCCGGGGAAATGTCTAGTGCACCAATGAACAAAGGAGGTGTTCCTCACATGAATGAATTACATTGCCATCAGAATCGTGACGTGAAACTTGAAGAAACTGTGAAGCGAAAATCTGATTTTGGGAGAGAAGAAAAGAAAGTAACTTGTTTTAATGCTGAATCTAGTAGTCTTATCGTGCTCTCCGACAGTGACAATGATGATGAGCCGGCTACTCTTACCAATGTAGTACCCAAAAGGAAGCGGTGTGATGATGGTTCCAGTGATGATCATCTGAATCCAAATCAGAGGGCCAGGAAACTCTCAGATTTGTCGGATGAGCTGGTCAAGCATACATCATCCATGTTCGCTAGCAAAAGTGGCAATCAGTTTGCTACACCTCAGAGGCAGACAGCGGCCGCTATTAGAAAATGCAATGAAATGCCTGATGCAAAAGTCAAGGAGTCCCTTAGTCGTAGTTTCTTTGATGATGACAGCATTCACAATGATGATACAAGCCTGTTTTGTAGTCCTCAAGCTAGAGAGCTTATAGCTGTTTGCCGAAGAAGCAGGGTCCAACAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11805.p1 GENE.S_Transcript_11805~~S_Transcript_11805.p1 ORF type:complete len:659 (+),score=177.09 S_Transcript_11805:153-1979(+)
MNSNSSSRSSPSRPISDIISALKSSFRETDFRQAIKDLEFRESKLIKDKVQNWHEKHHILEGDYRQLQIKVVELENELHCVRREREISANLLSDSTRDLSVVKEREEKAIKRYDKLIIDFRETERRKLKLNGELDELREDNKYKDERIKELVKKLEEQKRIARDDDGEKKVDELMRKIRVLEMENSELLKSNEVLERGKDEAVVRYKEMMDKICVLEMENSELLKSNAGLERVKHEAIARCEEMIEKTRVLENQVVELERENETLEEEEMRIVREKGEKIEELMKKIRVLEMENSELLKSNAGFERDKREASARYEEMMKKVRVLEDQVEEIGREDEKIQQMTKENEEMVAKIRCLEAEKRQLSEKNEELIKYKNEAIAKNEQMEKQVMKLEEDVVGLLPLNVARDRNSLNTHLEKIFEAICSGEMSSAPMNKGGVPHMNELHCHQNRDVKLEETVKRKSDFGREEKKVTCFNAESSSLIVLSDSDNDDEPATLTNVVPKRKRCDDGSSDDHLNPNQRARKLSDLSDELVKHTSSMFASKSGNQFATPQRQTAAAIRKCNEMPDAKVKESLSRSFFDDDSIHNDDTSLFCSPQARELIAVCRRSRVQQ*

Click here to download the sequence:
Link to NCBI Protein BLAST