Transcript Information: S_Transcript_118104.p1


Annotated TAIR IDAT3G63270.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: PIF / Ping-Pong family of plant transposases (TAIR:AT3G55350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:23375932-23377398 | Reverse length=396
E-Value1.4E-190
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6567482613225
Replicate 24.4911530905883
Replicate 33.0972533880856
Condition 2: 8 Hour
Replicate 15.6976233671729
Replicate 25.0094724689464
Replicate 36.291700565338
Condition 3: 24 Hour
Replicate 14.1132859498829
Replicate 25.7668731746431
Replicate 35.3267930931925


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_118104.p1 GENE.S_Transcript_118104~~S_Transcript_118104.p1 ORF type:complete len:393 (+),score=80.05,DDE_Tnp_4|PF13359.2|1.8e-25,Plant_tran|PF04827.10|5.8e-06 S_Transcript_118104:326-1504(+)
ATGGCTCCTTTGAAGAAGAAGAAGTCGAAGAAAACCAAAGATTTGAAGAAATTGAAGAAAAGCAAGACAGTAAATGTAGTCCCAATTGAACCCAGATCAATTGAATCGGATTGGTGGGATAGTTTCTGCCACAAGAGCTCCTCTGCCCCAGGTTTGACAATACCTAGTGATGAAGAGGAGGGGTTCAGATATTTCTTTAGGGTATCAAAAAAGACATTTGAGTATATATGTTCACTTGTAAGAGAGGATTTGATTTCAAGACCTCCTTCAGGGCTAATTAACATAGAAGGAAGGCTTCTTAGTGTCGAAAAGCAAGTTGCAATTGCTATGAGAAGGTTGGCTTCTGGTGATTCACAAGTTTCTGTTGGTGCAGCCTTTGGGGTTGGTCAGTCCACTGTGTCTCAGGTCACTTGGAGGTTCATTGAGTCGTTAGGGGAGCGTGCGAGGCACCATATTAAGTGGCCTAATCAGGACCGGTTAGACGAAATCAAATTGAAGTTTCAAACCTCTTTTGGGTTGCCTAATTGTTGTGGAGCCATTGATGCTACTCATATAGTTATGACCCTCCCGGCTGTTCAAACTTCGGATGATTGGTGTGATGAGTCTAACAATTATAGCATGTTGCTTCAAGGGATTGTTGATCATGAAATGCGGTTTTTGGACATTGTTACTGGTTGGCCAGGAGCAATGACTATATCTAGGATGTTGAAATGTTCAGGGTTTTACAAGCTTTGTGAAAGTGGCGAGAGATTGAATCAACAAGTGAAGTTAGATGGAGTAGAGATCAGAGAATACATAGTTGGAGGAATGCAATACCCTCTTCTTTCATGGCTCATGACCCCTTATGAAAATCAAGACCTTTCACCTAGTAAATCAAATTTTAGGGCTGCACATCAGGCTGCTAGATTACTTGCCGTAAGGGCACTCTCACATTTGAAGGGAAGTTGGAGAATTCTTAGCAAGGTCATGTGGAGACCAGACAAGAGGAAATTACCGAGCATTGTCTTGGTTTGTTGTTTACTTCACAATATCATGATTGATTGTGGTGATAACTTGCAATTAGATGTTGCTTCCCCTGTTCACCATGACTCGGGTTATGGAGAGCAGTGCTCAATGCATGTCGATACATTAGGGAGCATTATGAGGGATAATTTAGCCAAGCACTTGCAGTCTAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_118104.p1 GENE.S_Transcript_118104~~S_Transcript_118104.p1 ORF type:complete len:393 (+),score=80.05,DDE_Tnp_4|PF13359.2|1.8e-25,Plant_tran|PF04827.10|5.8e-06 S_Transcript_118104:326-1504(+)
MAPLKKKKSKKTKDLKKLKKSKTVNVVPIEPRSIESDWWDSFCHKSSSAPGLTIPSDEEEGFRYFFRVSKKTFEYICSLVREDLISRPPSGLINIEGRLLSVEKQVAIAMRRLASGDSQVSVGAAFGVGQSTVSQVTWRFIESLGERARHHIKWPNQDRLDEIKLKFQTSFGLPNCCGAIDATHIVMTLPAVQTSDDWCDESNNYSMLLQGIVDHEMRFLDIVTGWPGAMTISRMLKCSGFYKLCESGERLNQQVKLDGVEIREYIVGGMQYPLLSWLMTPYENQDLSPSKSNFRAAHQAARLLAVRALSHLKGSWRILSKVMWRPDKRKLPSIVLVCCLLHNIMIDCGDNLQLDVASPVHHDSGYGEQCSMHVDTLGSIMRDNLAKHLQSS*

Click here to download the sequence:
Link to NCBI Protein BLAST