Transcript Information: S_Transcript_118114.p2


Annotated TAIR IDAT5G05130.1
Annotated Gene NameDNA/RNA helicase protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1512173-1514918 | Forward length=862
E-Value1.1E-145
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5236466688533
Replicate 21.7117681553244
Replicate 31.5368946736334
Condition 2: 8 Hour
Replicate 12.0835151459268
Replicate 22.7643376192766
Replicate 33.1851266536179
Condition 3: 24 Hour
Replicate 10.87881715192045
Replicate 21.1071402206836
Replicate 31.2321113646177


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_118114.p2 GENE.S_Transcript_118114~~S_Transcript_118114.p2 ORF type:complete len:348 (+),score=58.77,SNF2_N|PF00176.19|9.1e-16,Helicase_C|PF00271.27|1.3e-10,zf-C3HC4_3|PF13920.2|2.2e-08,zf-RING_2|PF13639.2|1e-06,zf-C3HC4|PF00097.21|5.4e+03,zf-C3HC4|PF00097.21|6.4e-07,zf-RING_5|PF14634.2|66,zf-RING_5|PF14634.2|3e-06,zf-C3HC4_2|PF13923.2|1.6e+04,zf-C3HC4_2|PF13923.2|3.5e-06 S_Transcript_118114:1506-2549(+)
ATGGCCTTCCTGAAGTTTGATCCATTCTCCACTAAAAGCTACTGGAATAGTCTTGTACAGCGTCCACTAGCTCAAGGGAATAAATTAGGGATGGAACGACTTCAGGTCTTAATGGCCACTGTTTCGCTGAGGAGAACAAAGGACCAGAATCTGCTTGAGCTGCCGCCTAAATCTATACAGATATGTTATGTGGAACTTCTCCAAGAAGAACGTGAACTATATGATCGTTTGGAAGAAGAAGCCAAGAAGGTTGTAAAGACCTATATCAATGATGGGAGTGTCACATGCAATTATTACACTGTCCTTAGCATAATTTTGAGGCTTCGCCAAATCTGTACGGATGTTGCATTGTGCCCTCATGATATCAAATCTTTGCTCCCAGCTGACAGCATCGAAGACGTATCTAATAATCCTGAACTGCTGGAGAAGATGGTTTCAGTGCTGCAGGATGGTGAAGATTTCGACTGTCCAATTTGTATCTCTCCACCGACAGATATTGTGATTACTTGTTGTGCTCATATATTCTGCAGATCCTGCATAATTAAAACACTGAAGCGCACAAAGGCCAACTGTCCTATGTGCCGCCATCCTTTATCAGAGTCTGATCTCTACTCAGCCCCACCTGCAGAGTCATCAGATAAAGACAGCATGGGAGCATCCTCATCTAGAACGTCTTCAAAAGTGTCCATTATCTTGAAACTCCTTTCAGAGTCTAAAGATGAGACAGGGACTGTGAAGTCTGTTGTATTCTCACAATTCCGCAAGATGTTGGTATTACTTGAAGAACCACTCAAAGCTGCTGGATTCAAGATATTACGGTTGGATGGAACAATGAGTGCCAAAAAGAGAGCCCGTGTGATTGAAGAATTCGGTGTTTCTGGACCAGATTCACCAACAGTTTTGCTTGCCAGTCTCAAGGCCTGTGGTACCGGTATAAATCTTAAAGTGCTTCGGTGGTCTACTTGTTGGAGCCTTGGTGGAATCCAGCAACTGAGGAGCAGGCTATGGACCGTGTTCATAGAATTGGTCAGAAAAAAGATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_118114.p2 GENE.S_Transcript_118114~~S_Transcript_118114.p2 ORF type:complete len:348 (+),score=58.77,SNF2_N|PF00176.19|9.1e-16,Helicase_C|PF00271.27|1.3e-10,zf-C3HC4_3|PF13920.2|2.2e-08,zf-RING_2|PF13639.2|1e-06,zf-C3HC4|PF00097.21|5.4e+03,zf-C3HC4|PF00097.21|6.4e-07,zf-RING_5|PF14634.2|66,zf-RING_5|PF14634.2|3e-06,zf-C3HC4_2|PF13923.2|1.6e+04,zf-C3HC4_2|PF13923.2|3.5e-06 S_Transcript_118114:1506-2549(+)
MAFLKFDPFSTKSYWNSLVQRPLAQGNKLGMERLQVLMATVSLRRTKDQNLLELPPKSIQICYVELLQEERELYDRLEEEAKKVVKTYINDGSVTCNYYTVLSIILRLRQICTDVALCPHDIKSLLPADSIEDVSNNPELLEKMVSVLQDGEDFDCPICISPPTDIVITCCAHIFCRSCIIKTLKRTKANCPMCRHPLSESDLYSAPPAESSDKDSMGASSSRTSSKVSIILKLLSESKDETGTVKSVVFSQFRKMLVLLEEPLKAAGFKILRLDGTMSAKKRARVIEEFGVSGPDSPTVLLASLKACGTGINLKVLRWSTCWSLGGIQQLRSRLWTVFIELVRKKM*

Click here to download the sequence:
Link to NCBI Protein BLAST