Transcript Information: S_Transcript_11822.p2


Annotated TAIR IDAT5G41960.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16789760-16790868 | Forward length=217
E-Value7.7E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.320544328566
Replicate 220.783787264326
Replicate 323.587992164895
Condition 2: 8 Hour
Replicate 117.38482906288
Replicate 218.400034931949
Replicate 316.218579699442
Condition 3: 24 Hour
Replicate 124.298475476857
Replicate 220.857275870986
Replicate 316.814696270077


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11822.p2 GENE.S_Transcript_11822~~S_Transcript_11822.p2 ORF type:complete len:276 (+),score=45.84 S_Transcript_11822:3840-4667(+)
ATGATTCCTTTGAATTTGAGTATTACTACTACTCCAACTTCAGCCACAAGGCTCCATTCCTCTCCCCCCTTTGTCCTTGCCCCTTATTCTTCTAAGCAACTCAAACCTACACCACCTAGCCTCGCAACCCATAATCTCAGAACGCTGCTAATTCATCAGCTGAGAGGAATTGCAACTGGAAGAGGAAGAGGTGTACTAATATGTCGGGCGGAGTTTTCTCAAGACGCTCCTTTTGCCGTAGCCATAGGCGCGTGTATGCTCAACTCCCTCATATTTCCCTACACCGGCGACAAAGATGACGATGGTGATGAAGATGAAGAGTCGCCGGCGATGGGCGCCAGCGACGCCAGGTTTGCGGTTATGACCATCATTAGCTTCATCCCTTACTTCAATTGGCTGAGCTGGGTTTTTGCTTTGACTGATACGAGCAAGCTTAGATATGCTGTTTACGCTGCTGTTTATTTGGCCCCTTACCTCAGGACAAATCTATCACTTGCTCCAGAGGAGAGTTGGCTACCAATTGCAAGTATTGTTCTCTGCATTATTCATATACAGCTGGAAGCAAGTATTAGAAGTGGTGATATCAATGCCTTGGCCTTCTTGCATGAGACTGCTCAGTGTTTTGGTTTGGTTGCTAAAAGTAAAGACAATCACTCTAAAAGACCAGGAAAAATGCATGAGTCAAGGAGACGCAACAACATGAATCTACCCCAGGGGCAAACACAATCAAGGGATGAGATTGAAAGATGGAAAATTTCTAGAGAGCCTCCCCGAGAGCTTGAACATTTGAATGAAGACAATGATAAGGATGATGAAATGGAGCACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11822.p2 GENE.S_Transcript_11822~~S_Transcript_11822.p2 ORF type:complete len:276 (+),score=45.84 S_Transcript_11822:3840-4667(+)
MIPLNLSITTTPTSATRLHSSPPFVLAPYSSKQLKPTPPSLATHNLRTLLIHQLRGIATGRGRGVLICRAEFSQDAPFAVAIGACMLNSLIFPYTGDKDDDGDEDEESPAMGASDARFAVMTIISFIPYFNWLSWVFALTDTSKLRYAVYAAVYLAPYLRTNLSLAPEESWLPIASIVLCIIHIQLEASIRSGDINALAFLHETAQCFGLVAKSKDNHSKRPGKMHESRRRNNMNLPQGQTQSRDEIERWKISREPPRELEHLNEDNDKDDEMEH*

Click here to download the sequence:
Link to NCBI Protein BLAST