Transcript Information: S_Transcript_118255.p1


Annotated TAIR IDAT1G14420.1
Annotated Gene NamePectate lyase family protein
Annotated Gene Symbol(s)AT59
Annotation TypeOrtholog
Chromosome Positionchr1:4931844-4933405 | Reverse length=459
E-Value5E-181
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6745259204159
Replicate 22.0327513974339
Replicate 32.1965505897322
Condition 2: 8 Hour
Replicate 14.9359892194712
Replicate 24.021905373434
Replicate 34.4068718644006
Condition 3: 24 Hour
Replicate 12.454481291078
Replicate 22.495565769081
Replicate 31.3602900353321


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_118255.p1 GENE.S_Transcript_118255~~S_Transcript_118255.p1 ORF type:5prime_partial len:445 (+),score=67.35,Pec_lyase_C|PF00544.15|1.5e-18,Pec_lyase_N|PF04431.9|8.5e-19,Alpha-amyl_C2|PF07821.8|1.7e-06,Alpha-amyl_C2|PF07821.8|8.7e+03 S_Transcript_118255:2-1336(+)
GAGAGGGATGTTTATGGAGCAGTTATCGACGATAAAGTAGCTATGAAGATTGGACCTGGTCATTATGAACCGCCTATGACTTTGAATGCCAAGATTGCTGAGTTTGATGAATATTGGCTGAAGCGCCAAGAAGAAGCCAAGAAAGCCTTCCATGCAGCTTACAACCCTGACCCCCATAATGTCACTCATCACTTCAACCAACAAGTTCACCTGCACATGAAAGGACTAAATGTAAGGAGGAGCCTCCAAGGAAAGGTGAATTTCGGAGGTGGATGCAAGGCAACAAACCCTATGGACGCATGCTGGAGATGCCAACCAAACTGGGCGGAGGACAGAAAAAGGCTAACTGATTGTGTGATAGGGTTTGGTAAGGGAACCACGGGTGGCAAAGCAGGGAGATTCTACGTAGTCACGGACCCATCGGACAGTGACTTGGTGAACCCGAAACCTGGAACCCTACGTCATGCAGTGATCCAAGATGAGCCCTTATGGATCATCTTCGATCGCCCCATGAACATCAGGTTGAGCCAAGAGCTAATGGTGAATAGTGATAAGACCATTGATGCAAGGGGAGCTCAGGTCCACATTGCGCATGGAGCTGGTATTACTATCCAGTTTGTGAAGAATGTTATAATCCATGGTCTCCATATCCATGACATTTACCCTGGTAATGGTGGCATGATTAGGGACTCCACTACACATTATGGTTTCAGAACCAGAAGTGATGGTGATGCCATCTCTATTTTCGGATCTAGCAACATTTGGATTGATCATGTTTCTATGGCTAGAGGTACCGATGGCCTCGTTGATATCATTCAAGGTTCAACCGCCATCACCATCTCCAATTGCCACATGACTGACCACAATGAGGTTTTCCTCTTTGGAGCCACCAACGAGTATACAGAAGACACAAAAATGCAAGTCACAGTGGCATTCACCCACTTTGGTAAGGGCTTGGTTCAGAGGATGCCAAGGTGCCGATTTGGGTTCTTCCATGTAGTTAACAATGATTACACTCACTGGAGAATGTATGCCATTGGTGGTAGCCAACACCCCACCATCATCAGTCAAGGCAACCGATTCATCGCCCCTCATGATCTTAATGCCAAGGAGGTGACCAAGAGAGAAGCACCAGAATCAGAGTGGAAGTCATGGACATGGAGATCCGAAAACGATTTATTCATGAATGGAGCATATTTCAGGGCATCAGGATTCGGTAACCAAATCAGTGAAATCTCCAAGGCTGGTATGATACAAGCCATGCCAGGAACTATGGTGGGAGTTTTGACTCAATTTGCTGGACCAATCAAATGTATTCCTGGAAAGCCTTGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_118255.p1 GENE.S_Transcript_118255~~S_Transcript_118255.p1 ORF type:5prime_partial len:445 (+),score=67.35,Pec_lyase_C|PF00544.15|1.5e-18,Pec_lyase_N|PF04431.9|8.5e-19,Alpha-amyl_C2|PF07821.8|1.7e-06,Alpha-amyl_C2|PF07821.8|8.7e+03 S_Transcript_118255:2-1336(+)
ERDVYGAVIDDKVAMKIGPGHYEPPMTLNAKIAEFDEYWLKRQEEAKKAFHAAYNPDPHNVTHHFNQQVHLHMKGLNVRRSLQGKVNFGGGCKATNPMDACWRCQPNWAEDRKRLTDCVIGFGKGTTGGKAGRFYVVTDPSDSDLVNPKPGTLRHAVIQDEPLWIIFDRPMNIRLSQELMVNSDKTIDARGAQVHIAHGAGITIQFVKNVIIHGLHIHDIYPGNGGMIRDSTTHYGFRTRSDGDAISIFGSSNIWIDHVSMARGTDGLVDIIQGSTAITISNCHMTDHNEVFLFGATNEYTEDTKMQVTVAFTHFGKGLVQRMPRCRFGFFHVVNNDYTHWRMYAIGGSQHPTIISQGNRFIAPHDLNAKEVTKREAPESEWKSWTWRSENDLFMNGAYFRASGFGNQISEISKAGMIQAMPGTMVGVLTQFAGPIKCIPGKPC*

Click here to download the sequence:
Link to NCBI Protein BLAST