Transcript Information: S_Transcript_118275.p1


Annotated TAIR IDAT4G21705.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:11533257-11534817 | Reverse length=492
E-Value2.5E-203
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.9108711492559
Replicate 26.0099355067065
Replicate 34.065334297998
Condition 2: 8 Hour
Replicate 16.9173757121883
Replicate 26.3346811560516
Replicate 36.2266723290537
Condition 3: 24 Hour
Replicate 14.032299282314
Replicate 24.3865441760672
Replicate 33.9324692889697


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_118275.p1 GENE.S_Transcript_118275~~S_Transcript_118275.p1 ORF type:5prime_partial len:558 (+),score=107.12,PPR_2|PF13041.2|1.3e+04,PPR_2|PF13041.2|7.8,PPR_2|PF13041.2|0.0017,PPR_2|PF13041.2|3.4e-07,PPR_2|PF13041.2|1.3e+03,PPR_2|PF13041.2|2.3e+03,PPR_2|PF13041.2|1.4e+02,PPR_2|PF13041.2|0.36,PPR_2|PF13041.2|3e+02,PPR_2|PF13041.2|11,PPR|PF01535.16|0.00012,PPR|PF01535.16|0.11,PPR|PF01535.16|3.1,PPR|PF01535.16|2.3e+03,PPR|PF01535.16|1.6e+03,PPR|PF01535.16|1.6e+02,PPR|PF01535.16|0.75,PPR|PF01535.16|8.5,PPR|PF01535.16|4.1e+02,PPR_3|PF13812.2|9e+03,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|4.8,PPR_3|PF13812.2|0.073,PPR_3|PF13812.2|5.1,PPR_3|PF13812.2|2.5e+03,PPR_3|PF13812.2|2.7e+03,PPR_3|PF13812.2|7.8e+02,PPR_3|PF13812.2|4.3e+02,PPR_3|PF13812.2|82,TPR_11|PF13414.2|1.6e+03,TPR_11|PF13414.2|12,TPR_11|PF13414.2|0.0016,TPR_15|PF13429.2|9.5e+02,TPR_15|PF13429.2|6,TPR_15|PF13429.2|0.0084 S_Transcript_118275:1-1674(+)
CTTTTCCTTGAACCCCTCTCCCAAACCCTATACAGGGGAGAACTCTACTGTTTCAATCAATCCTCCATTTTCACCTCCCCAATTCGAAAGACAACATTTTGCAAAATACCCATTTCAGGAAAGATGAGCTTCAAGCTCTTCAAGATCTTAAAGCAATTAAGCTTGAAGCTAAATCAATCTCAATGTTCACCCCAAGCAGCTCTACTTGCAAGCTCTAATGTCATTGATAAAAGAAGGGGCTATTACACTACAAGCAAGCAAGGCAATACAAGCTTGTATTCAAAGATTAGCCCATTGGGAAATCCTAGGATCAGTGTAAAACCTGAGCTTGATTGTTGGGTCAAGACAGGAAAGAAGGTTCGAGTTGGTGAGTTGTTTAGGATTATCCATGATCTAAGGAAACGCAAAAGGTTCAGTCAGGCACTGGAGGTTTCAGAATGGATGTATGAGAAAGGGGTCTGTAAATTCACACCAACTGAACATGCTATTCACTTGGATCTAATTGGCAGAGTCCATGGATTTCTGTCAGCGGAAAGCTATTTCTATAGGTTACAAGAGCAAGACAAAACTGAAAAGACATACGGGGCTCTTCTTAACTGCTATGTGCGGCAACGCCAACTTGACAAATCATTGTCTCATTTGCAGAAGATGAAGGAAATGGGTTTTGCATTAACAACTCTAACATATAACGACATCATGTGCCTTTTCACTAATATTGGACAATATGAAAAGGTTCCTGAGGTACTGGCTGAGATGAAGGAAAACAAGGTTTTACCTGATAACTATACCTACAGACTCTGCATGAATTCTTATGGAGTAAGATCTGATCTCAAGGCAATGGAGAATGTTTTGAAAGAAATGGAGACTCAACCCCATTTGGCTGTTGACTGGAATACATATGCAGTCGCTGCCAACTTTTACATAAAAGGAGGACTTACAAATAAGGCAGTTGATGCCCTGAAGAAGGCAGAAATAAGACTAGATAGCAAAGATGGTACAGGCTACAATCATCTCATTTCCCTAAATGCAAAACTGGCGATGAAGCATGAGATATTGAGGTTATGGGAACTGGAGAAAATCGCTTGTAAGAGATGTATAAATAGGGATTTTGTTAATGTGCTGGAATCTCTTGTGAGGATTGATGCAGTAGAAGAAGCCGAGAAAGTGCTCAAGGACTGGGAATCATCTGATAATTGCTACATGTTTCGAGTTCCTAACATTGTCATCATGGGATATTTGGACAAGGGATCGTTTGCGAAAGCAGAAGCAATGCTTGAAGATTTGTCAGAGAAAGGAAAGGATTCTAGCCCAAACACTTGGGGCTTGTTGGCTGCAGGATACTTGGAGATGGGGAATATGCAGAAGGCAATGAGGTGCATGAAGGTAGCGTTTTCCCTCTACGAAGAAAATAGAGGATGGAAACCAAGCCACCAAGTTATCACCAAACTTCTGAATTGGGTCGGTGATCAAGGCAGTGTCGAAGACACTGAATCCTTTGTTGAATTGTTGAGGAAGGTGATTCATGAGAACACACATATGTATCATGCTCTGATGAAGGCATACATCCGTCATTCAAAGGATGTGAATGGGCTTCTAGAGAAGATGAAGGCTCATAAAGTAAAAGAAGACGAAGAAACAAAAAGGATCCTGAGCACAATACAGAAGAAAGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_118275.p1 GENE.S_Transcript_118275~~S_Transcript_118275.p1 ORF type:5prime_partial len:558 (+),score=107.12,PPR_2|PF13041.2|1.3e+04,PPR_2|PF13041.2|7.8,PPR_2|PF13041.2|0.0017,PPR_2|PF13041.2|3.4e-07,PPR_2|PF13041.2|1.3e+03,PPR_2|PF13041.2|2.3e+03,PPR_2|PF13041.2|1.4e+02,PPR_2|PF13041.2|0.36,PPR_2|PF13041.2|3e+02,PPR_2|PF13041.2|11,PPR|PF01535.16|0.00012,PPR|PF01535.16|0.11,PPR|PF01535.16|3.1,PPR|PF01535.16|2.3e+03,PPR|PF01535.16|1.6e+03,PPR|PF01535.16|1.6e+02,PPR|PF01535.16|0.75,PPR|PF01535.16|8.5,PPR|PF01535.16|4.1e+02,PPR_3|PF13812.2|9e+03,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|4.8,PPR_3|PF13812.2|0.073,PPR_3|PF13812.2|5.1,PPR_3|PF13812.2|2.5e+03,PPR_3|PF13812.2|2.7e+03,PPR_3|PF13812.2|7.8e+02,PPR_3|PF13812.2|4.3e+02,PPR_3|PF13812.2|82,TPR_11|PF13414.2|1.6e+03,TPR_11|PF13414.2|12,TPR_11|PF13414.2|0.0016,TPR_15|PF13429.2|9.5e+02,TPR_15|PF13429.2|6,TPR_15|PF13429.2|0.0084 S_Transcript_118275:1-1674(+)
LFLEPLSQTLYRGELYCFNQSSIFTSPIRKTTFCKIPISGKMSFKLFKILKQLSLKLNQSQCSPQAALLASSNVIDKRRGYYTTSKQGNTSLYSKISPLGNPRISVKPELDCWVKTGKKVRVGELFRIIHDLRKRKRFSQALEVSEWMYEKGVCKFTPTEHAIHLDLIGRVHGFLSAESYFYRLQEQDKTEKTYGALLNCYVRQRQLDKSLSHLQKMKEMGFALTTLTYNDIMCLFTNIGQYEKVPEVLAEMKENKVLPDNYTYRLCMNSYGVRSDLKAMENVLKEMETQPHLAVDWNTYAVAANFYIKGGLTNKAVDALKKAEIRLDSKDGTGYNHLISLNAKLAMKHEILRLWELEKIACKRCINRDFVNVLESLVRIDAVEEAEKVLKDWESSDNCYMFRVPNIVIMGYLDKGSFAKAEAMLEDLSEKGKDSSPNTWGLLAAGYLEMGNMQKAMRCMKVAFSLYEENRGWKPSHQVITKLLNWVGDQGSVEDTESFVELLRKVIHENTHMYHALMKAYIRHSKDVNGLLEKMKAHKVKEDEETKRILSTIQKKV*

Click here to download the sequence:
Link to NCBI Protein BLAST