Transcript Information: S_Transcript_11833.p1


Annotated TAIR IDAT4G14300.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:8231179-8232785 | Forward length=411
E-Value2.7E-149
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.206594123515
Replicate 223.604102201253
Replicate 325.40017544448
Condition 2: 8 Hour
Replicate 129.327732392225
Replicate 228.891389361084
Replicate 323.528270909291
Condition 3: 24 Hour
Replicate 123.152960346318
Replicate 221.442408557263
Replicate 323.913115952954


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11833.p1 GENE.S_Transcript_11833~~S_Transcript_11833.p1 ORF type:5prime_partial len:501 (+),score=162.77,RRM_1|PF00076.18|2.6e-16,RRM_1|PF00076.18|2.6e-16,RRM_6|PF14259.2|3.4e-13,RRM_6|PF14259.2|9.3e-13,RRM_7|PF16367.1|1.3e-06,RRM_7|PF16367.1|2.1e-07,RRM_5|PF13893.2|1.1,RRM_5|PF13893.2|0.046 S_Transcript_11833:1-1503(+)
AAAGAAACCACCAAAAAGAGAAAACCCGATATTTTGCCCCCACCGCCAAATGCACCCAAAATTCCAAACCCTAATTTCCTCTCTTCCCACTTTCCTTCCCCTCTTCATTTCAGAGCACGAGGGAAGAAGAACAACACCGACAAGCTAAACCCCACCCCCACCACCACAAACAAAACAAAAGAGAGACAAGAGTTTGTTAGTTTAGTGGTGATGGAATCAGATGAAGGGAAGCTCTTTGTGGGAGGAATAGCGTGGGACACAACTGAAGAGAAGCTTAGAGACTACTTCTCCAAGTACGGTGATGTTTCTCAGACTGTTGTTATGAGGGACAAAACCACTGGCCGTCCTAGAGGCTTTGGCTTTGTCATCTTCTCTGACCCTTCTGCCCTTGACTCTGTCCTCCAAGACAAGCACACCATTGATGACAGACTTGTAGAAGCTAAGAGAGCTCTCTCCAGAGAAGAACAAAGTGCCTTCAGGCAGGACCCATCTAATAATGGTGGCAGAGGGTCTGGAGGTGGTGGGAATTTTAGGACCAAAAAGATATTTGTTGGAGGGTTGCCTCCCTCTATAACAGAAGAAGGCTTCAGGCAGTACTTTGAGAATTATGGCCAAGTGACTGATGCTGTTATAATGTATGACCAAACTACTCAACGTCCACGTGGTTTTGGGTTCATTTCTTTTGATTCTGAGGATGCAGTTGATAGGGTTCTGCATAAGACTTTCCATGATTTGAATGGGAAAGATGTTGAAGTTAAACGTGCACTTCCTAAAGAAGCCAATCCTGGTGGCAACAACCGCGGTGGAGGCTATCAGAGCCATGGCTCCTCAAGGAACAATTCAGGCTCATATGACAATCGAATGGATGGAAATAGATTTATGCAACCTCAAAGTGGTGGGGGCTTTTCACAATACCCAGGCTATAATGCTGCCGGATATAGTGGTTATGGTGGTCCAGCTGGAAGCTTTGGTGGCTATGGTGGTTATGGTATGGGTGGTTATGGAAGTGGCGATGGTGGTTTTGCAGCCGCAACTGGAGGCTATGGAGGATCAAATGCTGCTGGTGCTGGTTATGGCAGTGGTCCTAATGCTATGAAAACTGCGTGGAACAACCAAACTTCTGGTTATGGCTCTTCTGGCTATGGTGGGGGTGCTGGCTATGGGCCCTCTGGTGCCTGGAACACTGCAGCTGCTGGTGGTGGTGCTGCACAAACAGGTCAGGTGCCTGGTGGGGCTCAGGGGTATGGTAACCAAGGATATGGTGGTTATGGAGGCAGTGGTTATGGGTCAGGAGGATATGGGGCTGTTGGTGGCCGCACCGGAAGTGGGCCTACTGGCAATTCTGATGGTGGCGATCGAGCAGCAGCTGGAGGTGGCTACATGGGAAGTGGTTATGGTGATAATAACCGGAATTCAGGCTATGGGGGTTCAGGCTGGAGGTCTGACCCTTCACAAGCTGCAGGTGGTTATGGTGATGCAAAATCTTGGCAGGGACAACAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11833.p1 GENE.S_Transcript_11833~~S_Transcript_11833.p1 ORF type:5prime_partial len:501 (+),score=162.77,RRM_1|PF00076.18|2.6e-16,RRM_1|PF00076.18|2.6e-16,RRM_6|PF14259.2|3.4e-13,RRM_6|PF14259.2|9.3e-13,RRM_7|PF16367.1|1.3e-06,RRM_7|PF16367.1|2.1e-07,RRM_5|PF13893.2|1.1,RRM_5|PF13893.2|0.046 S_Transcript_11833:1-1503(+)
KETTKKRKPDILPPPPNAPKIPNPNFLSSHFPSPLHFRARGKKNNTDKLNPTPTTTNKTKERQEFVSLVVMESDEGKLFVGGIAWDTTEEKLRDYFSKYGDVSQTVVMRDKTTGRPRGFGFVIFSDPSALDSVLQDKHTIDDRLVEAKRALSREEQSAFRQDPSNNGGRGSGGGGNFRTKKIFVGGLPPSITEEGFRQYFENYGQVTDAVIMYDQTTQRPRGFGFISFDSEDAVDRVLHKTFHDLNGKDVEVKRALPKEANPGGNNRGGGYQSHGSSRNNSGSYDNRMDGNRFMQPQSGGGFSQYPGYNAAGYSGYGGPAGSFGGYGGYGMGGYGSGDGGFAAATGGYGGSNAAGAGYGSGPNAMKTAWNNQTSGYGSSGYGGGAGYGPSGAWNTAAAGGGAAQTGQVPGGAQGYGNQGYGGYGGSGYGSGGYGAVGGRTGSGPTGNSDGGDRAAAGGGYMGSGYGDNNRNSGYGGSGWRSDPSQAAGGYGDAKSWQGQQ*

Click here to download the sequence:
Link to NCBI Protein BLAST