Transcript Information: S_Transcript_118347.p1


Annotated TAIR IDAT1G72220.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:27184388-27185629 | Reverse length=413
E-Value6.4E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 148.344327687576
Replicate 253.394561710199
Replicate 362.858082746473
Condition 2: 8 Hour
Replicate 1118.74078277173
Replicate 2110.00595396221
Replicate 3106.83149657645
Condition 3: 24 Hour
Replicate 180.140992687387
Replicate 255.117316910525
Replicate 371.636575825182


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_118347.p1 GENE.S_Transcript_118347~~S_Transcript_118347.p1 ORF type:complete len:169 (+),score=32.71,zf-RING_2|PF13639.2|1.1e+04,zf-RING_2|PF13639.2|5.1e-14,zf-RING_11|PF17123.1|3.9e-09,zf-RING_11|PF17123.1|5.1e+03,zf-rbx1|PF12678.3|4.5e-07,zf-C3HC4|PF00097.21|3.6e-07,zf-C3HC4_2|PF13923.2|2.8e-06 S_Transcript_118347:286-792(+)
ATGGGAGACTCATCAAGTGAGGCATTAGCACCTGAATCATTACAACAATATCAGCAGCAATCAGAGCAGTTCAACCTGGCCATGCTGTACTATGGCTTCTTTGTGATTGCAACAGCAGCCATAGTCCTGGCTATTTACCACTGTCTCATCATCAAATGGTTTGCTGAGGCCAGCAGTACTAGCCGGTCGTCGTGGGACACACCTGGAAGAGGTGGGCCCACCACTGCTCGGGCTCGGAAAATCGTCCAGCTGGCATCTAGTAAGTACTGCAAGAAGACTAGTCAGGATGGTCATGAAGAGTGTGTAGTTTGCTTGTCTCTGTTTGAAGAAGGGGAAGATATCAGAGAGCTTCCTGCATGTAAACACTCCTTCCATGTCCCTTGCATTGACACGTGGCTCTCCTCCCACATCGAGTGCCCCCTTTGTCGTGCTCCGGTGACTGGAGTTTCGACTCAGGCACCGGAGACTTCAAGAGGGGGTTTCTCTGATCCTGTTCAAGCAGTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_118347.p1 GENE.S_Transcript_118347~~S_Transcript_118347.p1 ORF type:complete len:169 (+),score=32.71,zf-RING_2|PF13639.2|1.1e+04,zf-RING_2|PF13639.2|5.1e-14,zf-RING_11|PF17123.1|3.9e-09,zf-RING_11|PF17123.1|5.1e+03,zf-rbx1|PF12678.3|4.5e-07,zf-C3HC4|PF00097.21|3.6e-07,zf-C3HC4_2|PF13923.2|2.8e-06 S_Transcript_118347:286-792(+)
MGDSSSEALAPESLQQYQQQSEQFNLAMLYYGFFVIATAAIVLAIYHCLIIKWFAEASSTSRSSWDTPGRGGPTTARARKIVQLASSKYCKKTSQDGHEECVVCLSLFEEGEDIRELPACKHSFHVPCIDTWLSSHIECPLCRAPVTGVSTQAPETSRGGFSDPVQAV*

Click here to download the sequence:
Link to NCBI Protein BLAST