Transcript Information: S_Transcript_118461.p1


Annotated TAIR IDAT1G07120.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: inflorescence meristem, petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G18570.1); Has 288 Blast hits to 260 proteins in 50 species: Archae - 0; Bacteria - 8; Metazoa - 27; Fungi - 15; Plants - 163; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:2184874-2186580 | Reverse length=392
E-Value3.2E-103
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1258906312126
Replicate 23.1331772152684
Replicate 32.8919083208013
Condition 2: 8 Hour
Replicate 12.3975290889084
Replicate 23.4418228676503
Replicate 32.6487147911515
Condition 3: 24 Hour
Replicate 13.4253811390577
Replicate 23.4196875455435
Replicate 33.0594787592005


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_118461.p1 GENE.S_Transcript_118461~~S_Transcript_118461.p1 ORF type:complete len:338 (+),score=81.02 S_Transcript_118461:122-1135(+)
ATGCAAAGGGGAAACAGCTCAGAAATCACCTTCCTAGTGGAAGATCTAGAAGCTGTTCTGGAGATGAACAGGTTATTGGAGAAGGAGAATCAAGAATTGAAACATGAAGTTTCTCGTCTAAAAGCTCAAGTTGCTTCTCTCAAAGCTCATGATCTTGAGAGGAAATCCATCCTCTGGAAGAAACTTCAACAACAACAAAAACAAGCAACTACAGAAACAACAACTGCAGAACAGAATTCAGTACTGTCAGAGCCTGCAAGCAAGAAATTGACAGCAGAACCAACAACAGCAACAAAGAAGTTAAACCAGCAAAACCCGTTGCCAAAAGGGCCGCCGCCACCACCACCACCACTGCCATCGAAAGCATTGGTGGGTTCGAGATTCACAGTCAAGCGAATGCCTGAAGTGATCGAATTTTATCGATACCTCAACAAAAGAAATACTCAGCTGGAAAACAGAACAAATGTAACAGGAACTTCTCCAGGGGAAGGGAATAATCCTAGGAACATGATTGGTGAAATCGAGAACCGATCAACATACCTTTCTGCTGTGAAGTCAGATGTGGAAACACAGAGAGAATTTATCCTGTTCTTGATCAGAAAAGTAGAAACAGCAGCCTTTAAGGAGATCTCAGCAGTGGAATCATTTGTAAAATGGCTGGATGAGGAACTTTCATGTCTAGTAGATGAGAGAGCTGTGTTGAAGCATTTCCCACAATGGCCAGAAAGAAAGGCTGATGCTTTCAGAGAAGCTGCTTGCACCTACCGCGATTTCAAGATCTTAGAGTCAGAAGTGGTTTCTTACAAAGACAATCCCAAGCTACCCTTGTCACAAACACTTGGACATATACAAGCCTTGCAAGACAGGCGAGTACGTATGCTATTAAAAAGACGACTAGAAAGGGCAATTAACAACACTGAAAGATCAAGAGAAGGGACATGTAATAGATACAAGGAACTGCAGATCCCTTGGGATTGGATGCAGAACACAGGTTACTTGGTCAGGTCAAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_118461.p1 GENE.S_Transcript_118461~~S_Transcript_118461.p1 ORF type:complete len:338 (+),score=81.02 S_Transcript_118461:122-1135(+)
MQRGNSSEITFLVEDLEAVLEMNRLLEKENQELKHEVSRLKAQVASLKAHDLERKSILWKKLQQQQKQATTETTTAEQNSVLSEPASKKLTAEPTTATKKLNQQNPLPKGPPPPPPPLPSKALVGSRFTVKRMPEVIEFYRYLNKRNTQLENRTNVTGTSPGEGNNPRNMIGEIENRSTYLSAVKSDVETQREFILFLIRKVETAAFKEISAVESFVKWLDEELSCLVDERAVLKHFPQWPERKADAFREAACTYRDFKILESEVVSYKDNPKLPLSQTLGHIQALQDRRVRMLLKRRLERAINNTERSREGTCNRYKELQIPWDWMQNTGYLVRSN*

Click here to download the sequence:
Link to NCBI Protein BLAST