Transcript Information: S_Transcript_118469.p1


Annotated TAIR IDAT1G07120.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: inflorescence meristem, petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G18570.1); Has 288 Blast hits to 260 proteins in 50 species: Archae - 0; Bacteria - 8; Metazoa - 27; Fungi - 15; Plants - 163; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:2184874-2186580 | Reverse length=392
E-Value6E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.498082850987
Replicate 21.5341674857875
Replicate 31.8320598758544
Condition 2: 8 Hour
Replicate 11.200435878779
Replicate 21.6297373181258
Replicate 30.42349366102612
Condition 3: 24 Hour
Replicate 11.3743469745738
Replicate 21.8761433424129
Replicate 31.8373674732204


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_118469.p1 GENE.S_Transcript_118469~~S_Transcript_118469.p1 ORF type:5prime_partial len:302 (-),score=77.84 S_Transcript_118469:82-987(-)
CAAAGGGGAAACAGCTCAGAAATCACCTTCCTAGTGGAAGATCTAGAAGCTGTTCTGGAGATGAACAGGTTGTTGGAGAAGGAGAATCAAGAATTGAAACATGAAGTTTCTCGTCTAAAAGCTCAAGTTGCTTCTCTCAAAGCTCATGATCTTGAGAGGAAATCCATCCTCTGGAAGAAACTTCAACAACAACAACAAAAACAGGCAACTACAGAAACAACAACTGCAGAACAGAATTCAGTACTGTCAGAGCCTGCAAGCAAGAAATTGACAGCAGAACCAACATCAGCATCAACAGCCACAACTGCAACAAAGAAGTTAAGCGAGGAAAACCCATTGCCAAAAGGGCCGCCACCACCACCACCACCACTGCCATCGAAAGCATCGGTGGGTTCGAGATTCACAGTCAAGCGAATGCCTGAAGTGATCGAATTTTATCGTTACCTCAACAAAAGAAATACTCAGCTGGAAAACAGAACAAATGTAACAGGAACTTCTCCAGGGGAAGGGAATAATCCTAGGAACATGATTGGTGAAATTGAGAACCGATCAACATACCTTTCTGCTGTGAAGTCAGATGTGGAAACACAAAGAGAATTTATCCTGTTATTGATCAGAAAAGTGGAAACAGCAGCCTTTACGGAGATCTCAGCAGTGGAATCATTTGTAAAATGGCTGGATGAGGAACTTACATGTCTAGTAGATGAGAGAGCTGTGTTGAAGCATTTCCCACAATGGCCAGAAAGAAAGGTTGATGCACTCAGAGAAGCTGCTTGCGCCTACCGCGATTTCAAGATCTTAGAGTCAGAAGTGGTTTCTTACAAAGACAATCCCAAGCTACCCTTGTCACAGACACTTGGACATATACAAGCCTTGCAAGACAGGCGAACTAGAAAGGGCAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_118469.p1 GENE.S_Transcript_118469~~S_Transcript_118469.p1 ORF type:5prime_partial len:302 (-),score=77.84 S_Transcript_118469:82-987(-)
QRGNSSEITFLVEDLEAVLEMNRLLEKENQELKHEVSRLKAQVASLKAHDLERKSILWKKLQQQQQKQATTETTTAEQNSVLSEPASKKLTAEPTSASTATTATKKLSEENPLPKGPPPPPPPLPSKASVGSRFTVKRMPEVIEFYRYLNKRNTQLENRTNVTGTSPGEGNNPRNMIGEIENRSTYLSAVKSDVETQREFILLLIRKVETAAFTEISAVESFVKWLDEELTCLVDERAVLKHFPQWPERKVDALREAACAYRDFKILESEVVSYKDNPKLPLSQTLGHIQALQDRRTRKGN*

Click here to download the sequence:
Link to NCBI Protein BLAST