Transcript Information: S_Transcript_118520.p1


Annotated TAIR IDAT1G63800.1
Annotated Gene Nameubiquitin-conjugating enzyme 5
Annotated Gene Symbol(s)UBC5
Annotation TypeOrtholog
Chromosome Positionchr1:23667888-23669003 | Reverse length=185
E-Value6.2E-98
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.406341348415
Replicate 214.430256953834
Replicate 39.0718323438251
Condition 2: 8 Hour
Replicate 16.6857980453714
Replicate 210.278957483118
Replicate 38.8720014355868
Condition 3: 24 Hour
Replicate 120.78215942889
Replicate 221.683754859532
Replicate 320.177635524093


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_118520.p1 GENE.S_Transcript_118520~~S_Transcript_118520.p1 ORF type:complete len:185 (+),score=40.89,UQ_con|PF00179.22|4.4e-40 S_Transcript_118520:376-930(+)
ATGTCTTCACCCAGTAAACGAAGAGAGATGGATGTTATGAAATTGATGATGAGTGACTACTCAGTGGAGATGATAAATGATGGGCTGAATGAATTCAATGTTTTATTCAATGGTCCTAAAGATAGCCTTTATGAAGGCGGAGTGTGGAAGATCTGGGTTGAGCTTCCAGATGCTTATCCCTATAAATCTCCTTCCATTGGGTTTGTGAACAAGATATTCCACCCAAATGTCGATGAACTGTCTGGTTCTGTGTGCCTGGATGTTATCAACCAATCATGGAGTCCTATGTTCGATCTTTTAAATGTGTTTGAAGTTTTTCTTCCGCAACTTCTACTTTACCCGAATCCTTCAGACCCTCTCAATGGCGATGCTGCCTCATTAATGATGAAGGATCGACAGCAATATGAACAGAAAGTAAAAGAATATTGTGATCGCTATGCTAAGAAAGAGAATATTACGAGCAATGCTGTTGAGGATGGAAGTGATGAGGAGGATATCAGCGATGGGCAATGCACTTCAAGTGACGATGAAATTGCTGGACATGCAGACCCGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_118520.p1 GENE.S_Transcript_118520~~S_Transcript_118520.p1 ORF type:complete len:185 (+),score=40.89,UQ_con|PF00179.22|4.4e-40 S_Transcript_118520:376-930(+)
MSSPSKRREMDVMKLMMSDYSVEMINDGLNEFNVLFNGPKDSLYEGGVWKIWVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRQQYEQKVKEYCDRYAKKENITSNAVEDGSDEEDISDGQCTSSDDEIAGHADP*

Click here to download the sequence:
Link to NCBI Protein BLAST