Transcript Information: S_Transcript_11862.p1


Annotated TAIR IDAT2G40316.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 27 (InterPro:IPR018939); Has 138 Blast hits to 138 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 32; Fungi - 62; Plants - 33; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16836355-16838688 | Forward length=276
E-Value2E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8927175255631
Replicate 22.1583163697569
Replicate 34.6106840209001
Condition 2: 8 Hour
Replicate 14.635954416768
Replicate 24.6202730886392
Replicate 35.5606558969517
Condition 3: 24 Hour
Replicate 12.3744438576733
Replicate 22.4634577800378
Replicate 33.8381371920829


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11862.p1 GENE.S_Transcript_11862~~S_Transcript_11862.p1 ORF type:3prime_partial len:92 (+),score=7.41 S_Transcript_11862:282-554(+)
ATGATGATGATGATGATGATGATGATGATGAATGCTCACGTTTGGGTGGCCAAGCTCACTCTCTTTCTACTACTTACAATTACTAGCTTCAACTCTGTCTATTCTATTTCTACTGCTACTTGCGAATACAGTACCCTTGAGAGCAACAAGCTTTATAGTTATAGTTTAGCTTCTCCGATCAATAAATTTCCTCATGGCCTTCTCAGCGAGGATGGGTATGTTCCCTTTTTCCCAATCCCCTGCATCTTTCATTTTGCTGTTTTGAATATTAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11862.p1 GENE.S_Transcript_11862~~S_Transcript_11862.p1 ORF type:3prime_partial len:92 (+),score=7.41 S_Transcript_11862:282-554(+)
MMMMMMMMMMNAHVWVAKLTLFLLLTITSFNSVYSISTATCEYSTLESNKLYSYSLASPINKFPHGLLSEDGYVPFFPIPCIFHFAVLNIN

Click here to download the sequence:
Link to NCBI Protein BLAST