Transcript Information: S_Transcript_118639.p1


Annotated TAIR IDAT3G23560.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)ALF5
Annotation TypeHomolog
Chromosome Positionchr3:8454361-8456588 | Reverse length=477
E-Value8E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.143328958538
Replicate 20.74036206568842
Replicate 30.61888376119465
Condition 2: 8 Hour
Replicate 11.5743576744192
Replicate 20.6005865406638
Replicate 31.0014156592944
Condition 3: 24 Hour
Replicate 12.1991493446907
Replicate 21.2168489436965
Replicate 32.7084074528984


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_118639.p1 GENE.S_Transcript_118639~~S_Transcript_118639.p1 ORF type:5prime_partial len:149 (+),score=23.74,MatE|PF01554.14|1.6e-16 S_Transcript_118639:2-448(+)
TTGGAATATTGGGCTTTTGAGATCTCAGTGTTGTTGGCTGGGTTGACACCAAACTCAACAATAACTACTTCTGTGATTGCAATGTGTGTTAATACAGAGACTGTTGCATACAATTTTACTTATGGATTGAGTGCTGCAGCAAGCACGAGGGTGTCTAATGAGCTTGGAGCTGGAAGAGCAAATGAAGCAAAGCACGCTATGAGCATATCATTGAAGCTGTCAATTCTTGTAGCTCTGGTGGTTGTTCTTGTTCTAGGCTTGGGGCATTGTATATGGGCAGGCTTCTTCAGTGACAATGCCACTGTGATTGAAGCATTCGCTTCCATGACGCCTCTCCTTTGCATTTCAATCTTCTGTGACTCGATCCAAGGCATTCTATCAGGTCTTCTCGTCTTTTTTTTCTCTAATTTCAAGTTTCAGTTAGGATGTCATCTTATTTGGTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_118639.p1 GENE.S_Transcript_118639~~S_Transcript_118639.p1 ORF type:5prime_partial len:149 (+),score=23.74,MatE|PF01554.14|1.6e-16 S_Transcript_118639:2-448(+)
LEYWAFEISVLLAGLTPNSTITTSVIAMCVNTETVAYNFTYGLSAAASTRVSNELGAGRANEAKHAMSISLKLSILVALVVVLVLGLGHCIWAGFFSDNATVIEAFASMTPLLCISIFCDSIQGILSGLLVFFFSNFKFQLGCHLIWL*

Click here to download the sequence:
Link to NCBI Protein BLAST