Transcript Information: S_Transcript_11864.p1


Annotated TAIR IDAT2G40316.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 27 (InterPro:IPR018939); Has 138 Blast hits to 138 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 32; Fungi - 62; Plants - 33; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16836355-16838688 | Forward length=276
E-Value2.4E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7377810723568
Replicate 25.9495162851725
Replicate 33.7299915674698
Condition 2: 8 Hour
Replicate 15.5110559246524
Replicate 25.4044353455519
Replicate 35.9875976418487
Condition 3: 24 Hour
Replicate 15.0316866467099
Replicate 24.5836922289242
Replicate 35.5261782685367


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11864.p1 GENE.S_Transcript_11864~~S_Transcript_11864.p1 ORF type:3prime_partial len:178 (+),score=12.03 S_Transcript_11864:241-771(+)
ATGATGATGATGATGATGATGATGATGATGAATGCTCACGTTTGGGTGGCCAAGCTCACTCTCTTTCTACTACTTACAATTACTAGCTTCAACTCTGTCTATTCTATTTCTACTGCTACTTGCGAATACAGTACCCTTGAGAGCAACAAGCTTTATAGTTATAGTTTAGCTTCTCCGATCAATAAATTTCCTCATGGCCTTCTCAGCGAGGATGGGTTTTATAAAGTTGCAAGAAATGATACTATTATCTGGTTTCAGCTTTGCGATGGGATGATCTTCAACCATGATCCTCCTAGATGCGTTGATTGTTGGGATTGTGGTGGCCCATCGCGCTGCGGTATGGGTTGTAGTGCACTTGTGGCTAAGGACACTGGTGGCTACCATGTTTGCATAGCTATTGGCCGTGATTTGAAGTTCGGCATCAATCTAATGGATAAAAGGACTCCAGATTTGGGTGTCAATGTTACGATGTCAAGCAATAGCCACGGATTCAACTGTTCACTTTCTATCTCTGTCGTATGCGACTTAAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11864.p1 GENE.S_Transcript_11864~~S_Transcript_11864.p1 ORF type:3prime_partial len:178 (+),score=12.03 S_Transcript_11864:241-771(+)
MMMMMMMMMMNAHVWVAKLTLFLLLTITSFNSVYSISTATCEYSTLESNKLYSYSLASPINKFPHGLLSEDGFYKVARNDTIIWFQLCDGMIFNHDPPRCVDCWDCGGPSRCGMGCSALVAKDTGGYHVCIAIGRDLKFGINLMDKRTPDLGVNVTMSSNSHGFNCSLSISVVCDLN

Click here to download the sequence:
Link to NCBI Protein BLAST