Transcript Information: S_Transcript_118641.p1


Annotated TAIR IDAT3G23560.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)ALF5
Annotation TypeHomolog
Chromosome Positionchr3:8454361-8456588 | Reverse length=477
E-Value4E-120
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.8114097246364
Replicate 26.5412290647908
Replicate 37.3214881939922
Condition 2: 8 Hour
Replicate 13.3220457277946
Replicate 23.7099045482964
Replicate 31.9816240235787
Condition 3: 24 Hour
Replicate 14.1164981452125
Replicate 24.3847072647707
Replicate 34.5627819024331


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_118641.p1 GENE.S_Transcript_118641~~S_Transcript_118641.p1 ORF type:3prime_partial len:398 (+),score=40.53,MatE|PF01554.14|4.7e-34,MatE|PF01554.14|4.9e+02,MatE|PF01554.14|3.5e-17 S_Transcript_118641:110-1300(+)
ATGAGGAACAGGGGTACCGACGACGATGCGGCGCCGTTTCTATCAGCAAACAGAGGAGAGAGAATGCGATGGTGGAGAAAAGTGTTGGACATGGAAGAGGCCAAAGTTCAGATGGGTTTAGCTGTGCCTATGATTTTGACCAACGTGTTCTATATAATGATGCCTATGATCTCGGTCATGTTCACCGGTCATCTCGGTCAGCTTCAACTTGCTGGCTCTACTCTCGCCAATTCTTGGGCCACCGTTACTGGCTTTGCCTTCATGCTAGGCCTCAGTGGTGCTCTAGAGACACTATGTGGGCAAGGATTTGGGGCGCAACTGTATAAAATGCTAGGAATATATCTACAAGCTTCGTGCATAATATCATTCATTTTCTCCTTAATCATATCCTTAATTTGGTGGCATACAGAGCCTATTTTGAATTTACTCCATCAAAACCCTGATATTTCAAGAGAAGCAGCTATCTACATGAGATGTCTGATCCCGGGGATATTTGCTTACGGTTTTCTCCAGAATATTTTGAGATTTCTTCAGACCCAATGCACGGTTATACCCTTGATGATCTGTTCATTGGTGCCATTGATTTTGCACTTTGGCCTTAACTATGTGTTGGTCCATTGCACTGCCCTTGCTTATAGGGGTGCTTCATTTGCTACCTCAATCACCTTCTGGCTATCGTTTATAATGTTGTTAGTTTATGTGAGCTGTTCGAAAAAATTTGAGCATACTTGGAGAGGATTTTCCATGGAATCATTTCATTATGTCTTTAGCAATTTGAGATTGGCATTGCCTTCTGCTGCTATGGTTTGTTTGGAATATTGGGCTTTTGAGATCTCAGTGTTGTTGGCTGGGTTGACACCAAACTCAACAATAACTACTTCTGTGATTGCAATGTGTGTTAATACAGAGACTGTTGCATACAATTTTACTTATGGATTGAGTGCTGCAGCAAGCACGAGGGTGTCTAATGAGCTTGGAGCTGGAAGAGCAAATGAAGCAAAGCACGCTATGAGCATATCATTGAAGCTGTCAATTCTTGTAGCTCTGGTGGTTGTTCTTGTTCTAGGCTTGGGGCATTGTATATGGGCAGGCTTCTTCAGTGACAATGCCACTGTGATTGAAGCATTCGCTTCCATGACGCCTCTCCTTTGCATTTCAATCTTCTGTGACTCGATCCAAGGCATTCTATCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_118641.p1 GENE.S_Transcript_118641~~S_Transcript_118641.p1 ORF type:3prime_partial len:398 (+),score=40.53,MatE|PF01554.14|4.7e-34,MatE|PF01554.14|4.9e+02,MatE|PF01554.14|3.5e-17 S_Transcript_118641:110-1300(+)
MRNRGTDDDAAPFLSANRGERMRWWRKVLDMEEAKVQMGLAVPMILTNVFYIMMPMISVMFTGHLGQLQLAGSTLANSWATVTGFAFMLGLSGALETLCGQGFGAQLYKMLGIYLQASCIISFIFSLIISLIWWHTEPILNLLHQNPDISREAAIYMRCLIPGIFAYGFLQNILRFLQTQCTVIPLMICSLVPLILHFGLNYVLVHCTALAYRGASFATSITFWLSFIMLLVYVSCSKKFEHTWRGFSMESFHYVFSNLRLALPSAAMVCLEYWAFEISVLLAGLTPNSTITTSVIAMCVNTETVAYNFTYGLSAAASTRVSNELGAGRANEAKHAMSISLKLSILVALVVVLVLGLGHCIWAGFFSDNATVIEAFASMTPLLCISIFCDSIQGILS

Click here to download the sequence:
Link to NCBI Protein BLAST