Transcript Information: S_Transcript_118684.p2


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value2E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6091177681549
Replicate 22.3793204424771
Replicate 32.3505447949687
Condition 2: 8 Hour
Replicate 12.9792824707759
Replicate 23.5641425528976
Replicate 32.8212151241887
Condition 3: 24 Hour
Replicate 12.6770690552199
Replicate 22.0552966380511
Replicate 32.7818431329172


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_118684.p2 GENE.S_Transcript_118684~~S_Transcript_118684.p2 ORF type:complete len:408 (+),score=58.94,zf-RVT|PF13966.2|1.5e+04,zf-RVT|PF13966.2|2.3e-16,zf-RVT|PF13966.2|2.3e+03,zf-RVT|PF13966.2|3e+03 S_Transcript_118684:1942-3165(+)
ATGAATAGAAACAAATCTGCTATGTATTTAGGTGGTGTGGAGCAGCAGACAAAGGTTGTTCTGGAGCAGATGACTGGTGTGACAATTGCCTCTCGTCCTTTCTCTTATTTGGGAGTACCAATTACATCTAAAAGATTATCAGTTGGTAACTGTGACTATTTAGTTGAGAAGTTGACAACTAGAATAAGACAATGGAGATCTAAGCATTTGTCTTATGCTGGTAGAGTAATCTTGGTGAATTCTGTATTGTTGAGCATGCATACCTATTGGGCTAGAGTCTTCCTAATTCCTAAAACCGTTCTTAGGAAGGTTATGGCTATTAGTAGGAACTTTCTTTGGTCTGGATCTGATCAGTTTCAAAGTTCTCCTCCTGTAGCTTGGGATTTCATCTGTAAAAAGAAGAAATATGGGGGACTTGGTCATAAGGAGTGTATTACCTCAAACATTGCTGCCTCGGGGAAATATGTGTGGGCTGTGGCATTAAAAGAAGACTCTCTTTGGGTGAAGTGGGTGCATAATATCTATATTAAGGAGACGGACTGGTGGTTGCATAAACCACCAGTAGGAGCTAGTTGGGCTTGGAAAACAATCTGCCAGGTTAGGGAGACTCTCAGAGATGGGTTTGATGGTGCTATTTGGAAGGATTCTTCAAAGGGGATGTATAGTATGGCCAGTGGCTATGCTTGGCTCAGAAAAGAGAGCGACAAATTTCAATGGGATAAGTTGGTTTGGAATAGATACAATGTACCCAAACACTCCTTTATAGCCTGGATGATTATGCTTGGTAAGATCAAGACTAGTGATCTTCTTCTAAAGTGGGGACTTAATATTGCAGCAGAATGCCCCTTATGTGAAGGTGACAGGGAATCCGTTGCCCATCTCTATTATGATTGTCCATTTAGCAAAATAATTCTGCAAATGTTTTGCACTTGGATGAGTATGCCTTTGAGGAGCTGGACTTTATATACTTTAGCAAAATGGGCCATGTGTAAGTATAAAATATCTAAACTTGGCAGGAAAGTACTCTATGCAGGAGTTGTAGGGATGATGTACTTTATCTGGAGGACAAGAAATGCTGCTGTGTGGGAAAAGAAGGTGACTATACCTGACAAAGTTTTCAAGGAGCTAAAACTGAAGGTGCAACAAAGGATAAGGTGCTGTTTGCCTGCAAAGCTCAGTAAGCAGGATGAGAAAATGTTAGCCAGCTTCCTTAAAATTGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_118684.p2 GENE.S_Transcript_118684~~S_Transcript_118684.p2 ORF type:complete len:408 (+),score=58.94,zf-RVT|PF13966.2|1.5e+04,zf-RVT|PF13966.2|2.3e-16,zf-RVT|PF13966.2|2.3e+03,zf-RVT|PF13966.2|3e+03 S_Transcript_118684:1942-3165(+)
MNRNKSAMYLGGVEQQTKVVLEQMTGVTIASRPFSYLGVPITSKRLSVGNCDYLVEKLTTRIRQWRSKHLSYAGRVILVNSVLLSMHTYWARVFLIPKTVLRKVMAISRNFLWSGSDQFQSSPPVAWDFICKKKKYGGLGHKECITSNIAASGKYVWAVALKEDSLWVKWVHNIYIKETDWWLHKPPVGASWAWKTICQVRETLRDGFDGAIWKDSSKGMYSMASGYAWLRKESDKFQWDKLVWNRYNVPKHSFIAWMIMLGKIKTSDLLLKWGLNIAAECPLCEGDRESVAHLYYDCPFSKIILQMFCTWMSMPLRSWTLYTLAKWAMCKYKISKLGRKVLYAGVVGMMYFIWRTRNAAVWEKKVTIPDKVFKELKLKVQQRIRCCLPAKLSKQDEKMLASFLKIA*

Click here to download the sequence:
Link to NCBI Protein BLAST