Transcript Information: S_Transcript_11871.p1


Annotated TAIR IDAT2G04039.3
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 38 Blast hits to 38 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:1333464-1334457 | Forward length=206
E-Value8E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3608921086172
Replicate 22.1310649004418
Replicate 33.038859922866
Condition 2: 8 Hour
Replicate 13.2715087418329
Replicate 23.05070663269
Replicate 31.574466016277
Condition 3: 24 Hour
Replicate 13.3512037173071
Replicate 22.1891181636245
Replicate 33.0094484801559


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11871.p1 GENE.S_Transcript_11871~~S_Transcript_11871.p1 ORF type:complete len:176 (+),score=49.65,DUF2996|PF11210.4|1.1e-13 S_Transcript_11871:1692-2219(+)
ATGAAATTATTTCAAGTTTCATTCTTGATAGTTTCTGCTGAGACAAAGGAAGCAACACCAGAAACAGAAACAAAGGAAGCAAAGCCAGAAGCAGAAACAAAGGAAGTGAAGCCAGAAACTGAAACAAAGGAAGCAAAGCCAGAAGCAAAAGCCGCCCCTGCAAAGCCAAAACCTGTAGCCAAAGCTCCTGCTAAATCATTGCCTCAGATGATGGACGAAGATATAATCCCTACTCTAAGATCAATCCTTGAAGAACAACAAGACATAACCGACCTCGAGTTGTTTTTCACGGACAATAGATTGGAAGGCTCATTTCTGCAAAAGGACAAACCATACACATTTTGGGCATTTTTCCCAGATGGAGTTCTTACAGGTCCAAGAGGATTTTCGCTCTCCTGTTGCGGATCAGAAGTGAGCACAGTGGAACCATTCCTTGTTGATGAGAAGAAAATTACAGCAAAGCTTGTGGTGATTTGGGTTGAGAAGCGATTGGCAGCTCAAGGGATTATTCCTGTGTGGAAAGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11871.p1 GENE.S_Transcript_11871~~S_Transcript_11871.p1 ORF type:complete len:176 (+),score=49.65,DUF2996|PF11210.4|1.1e-13 S_Transcript_11871:1692-2219(+)
MKLFQVSFLIVSAETKEATPETETKEAKPEAETKEVKPETETKEAKPEAKAAPAKPKPVAKAPAKSLPQMMDEDIIPTLRSILEEQQDITDLELFFTDNRLEGSFLQKDKPYTFWAFFPDGVLTGPRGFSLSCCGSEVSTVEPFLVDEKKITAKLVVIWVEKRLAAQGIIPVWKE*

Click here to download the sequence:
Link to NCBI Protein BLAST