Transcript Information: S_Transcript_11872.p1


Annotated TAIR IDAT2G04039.3
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 38 Blast hits to 38 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:1333464-1334457 | Forward length=206
E-Value5.5E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 177.873270659761
Replicate 286.370806847317
Replicate 376.809804257268
Condition 2: 8 Hour
Replicate 127.141405858169
Replicate 235.464464605021
Replicate 328.945952145401
Condition 3: 24 Hour
Replicate 1105.87321373566
Replicate 2101.98715209356
Replicate 3106.33384629884


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11872.p1 GENE.S_Transcript_11872~~S_Transcript_11872.p1 ORF type:complete len:176 (+),score=58.25,DUF2996|PF11210.4|3.1e-14 S_Transcript_11872:1692-2219(+)
ATGAAATTATTTCAAGTTTCATTCTTGATAGTTTCTGCTGAGACAAAGGAAGCAAAGCCAGAGGCAGAAACAAAGGAAGAGAAACCAGAAGCAGAAACAAAGGAAGCAAAGCCAGAAACTGAAACGAAGGAAGCAAAGCCAGAAGCAAAAGCCGTCCCTGCAAAACCAAAACCTGCAGCCAAAGCTCCTGCTAAATCTTTGCCTCAGATGATGGAGGAAGATATAATCCCTGCTCTAAGATCAATCCTTGAAGAACAAGAAGACATAACCGACCTTGAATTGTTTTTCAAGGACAATAGATTGGAAGGTTCATTTCTGCAAAAGGACAAACCATACACATTTTGGGCATTTTTCCCAGATGGAGTTCTTACAGGTCCAAGAGGATTTTCGCTCTCCTGTTGCGGATCAGAAGTGAGCACAGTGGAACCATTCCTTGTTGATGAGAAGAAAATTACAGCAAAGCTTGTGGTGATTTGGGTTGAGAAGCGATTGGCAGCTCAAGGGATTATTCCTGTGTGGAAAGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11872.p1 GENE.S_Transcript_11872~~S_Transcript_11872.p1 ORF type:complete len:176 (+),score=58.25,DUF2996|PF11210.4|3.1e-14 S_Transcript_11872:1692-2219(+)
MKLFQVSFLIVSAETKEAKPEAETKEEKPEAETKEAKPETETKEAKPEAKAVPAKPKPAAKAPAKSLPQMMEEDIIPALRSILEEQEDITDLELFFKDNRLEGSFLQKDKPYTFWAFFPDGVLTGPRGFSLSCCGSEVSTVEPFLVDEKKITAKLVVIWVEKRLAAQGIIPVWKE*

Click here to download the sequence:
Link to NCBI Protein BLAST