Transcript Information: S_Transcript_11883.p1


Annotated TAIR IDAT5G25800.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:8979761-8982724 | Reverse length=567
E-Value1.2E-238
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.9826191359632
Replicate 28.8105529256082
Replicate 37.9431586102636
Condition 2: 8 Hour
Replicate 16.3694647646882
Replicate 27.3096139119899
Replicate 37.4922038611568
Condition 3: 24 Hour
Replicate 17.4979138053525
Replicate 28.5269786128832
Replicate 37.1587320753795


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11883.p1 GENE.S_Transcript_11883~~S_Transcript_11883.p1 ORF type:5prime_partial len:606 (+),score=90.66,RNase_T|PF00929.20|5.7e-10,RNase_T|PF00929.20|6.7e+03 S_Transcript_11883:2-1819(+)
CTTCCCCCTTCGCTTCCCATTCTGGCATTCCATGTTTTCTGCAGGTCCTACTTTCTTTCTCTCTCCTCTCCTTCTTCCACTCAGTTCAAACCCAGAATGAGCTCTCCCTCTCCCTCTATATCACCCAATAACCAAACCCTAACTTCAACTGATGACCACAATGACAACAACTCTTCCAAAACTTACTTCGATATTTACGGCCCTCAGGCGAGAGCTGAGGTTGAATTGAAGAAACCAGAAGCTAATTCCACTTTGAGTTTGCAAGATGTACAAGGGCTAGTCACATGGGTGCTTGCTGATGGTTTCATGCCTTCTTGGGCTTTTATCAAAAACAAGCCTCTAATTCCGAAAGTGGTTCTTCTATATGTGCCAGGCCTTGATGCAGCATTATATATGTCACAGTTAAAATTGTTTACTGGTTTGAAAGAGTGCCTTGGCAACCCTAGGGCAGTTCAGGCTTTGAGCTGTGTGTTAGATGGCATTCAAACAATTGACACCCTTCTGACGTGCAAGCTCGAAAGGAAAAGGGATGAACCTGTTTTACTGTCCAGGAACTCTGACGAGTCAGCTGGGAAAGAATCTAGCTCGTCCTTGTCAAACAACTCATCTCCAAGTGAGCATAGGAAGGAGTTCAACATTGCCTATTATATTCTTACAGAAAAACAGCTGGAACATAATGGATATTGCCTCAATCAGTCTGGTTTTCTTTGTACCCGTCCGGCGCCTTCTGGTTCTCCCCCTTGTGAAATGTTAGCTCTTGACTGCGAGATGTGTGTCACATGCAATGGATTTGAGCTGACACGGGTGACGCTTGTAGATGTTAAAGGTCAGGTTGTGTTAGACAAGCTAGTTAAGCCGTCAAACCCAATTATTGATTACAACACTAGATATAGTGGAATCACACCTGAAATGCTGAGCGATGTTACTACAGGTCTTGAAGACATCCAGGAAGAATTTTTGAAGCTGGTCTACAAAGAGACCATTCTAATTGGACATTCGTTAGAGAATGACTTACTGGCATTGAAAATCTCGCATCATCTAGTTATTGACACTGCAATACTTTACAAGCATCCTCGTGGGGGCTCATATAAAACCGCTCTTCGGGTGCTTGCCAGGAGATTTCTTTCCAAAGCTATACAGGATTCAGGAAGTGGCCATGACAGCATAGAAGATGCAAGAACAGCTATGGAACTGGCTTTACTGAAGTTTAAAAATGGGCCTGACTTTGGCTTACCACAACAATTTATGCGGAAGAAGCTTCTTACTGTTTTGAGTGAATATGGAAAAACATCATCATTTATCGATGATATGTCCATTGTGAAGCGTTATGCTTCTGGGACATGCCATGCTTTGCCCGTCTTCTCTGACGATGAAGCACTCTCAAAAGCTGTAAAAGAGGTAAAAAATGTCAAGGTGCATTTTGTTTGGACTCAGTTCTCGGAAATAAATTCCTATTTTAAGAAGCAAGCGGATGATGAAGAAAAATTTAATGCAAGGCTTGCAGAGTTGATATCTTTGCTTACGTGTCAGAATAATTCTTCTGCTAAAAAGCGCATAAAACATAGTTTGCCATCGGGTCTCAAAGAAATACTAACTCGCACAGATTCCCGAATTCACAATCTTTATACAAGTTTGCCTACGAATACTATGCTCATTGTATTTACGGGCCAGGGAGACACAGCAATAATTCACAGATTGCGGAAGATGCTAACAGAGCAAACCAAAACCGCGTTATGCCGAGAAAAGCTTTTAAAGGTCTTGGAAGAGCAGCAGGCCCAAGCCGAAGTAGCATTGTGCTTTGTTGGTATAAAACATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11883.p1 GENE.S_Transcript_11883~~S_Transcript_11883.p1 ORF type:5prime_partial len:606 (+),score=90.66,RNase_T|PF00929.20|5.7e-10,RNase_T|PF00929.20|6.7e+03 S_Transcript_11883:2-1819(+)
LPPSLPILAFHVFCRSYFLSLSSPSSTQFKPRMSSPSPSISPNNQTLTSTDDHNDNNSSKTYFDIYGPQARAEVELKKPEANSTLSLQDVQGLVTWVLADGFMPSWAFIKNKPLIPKVVLLYVPGLDAALYMSQLKLFTGLKECLGNPRAVQALSCVLDGIQTIDTLLTCKLERKRDEPVLLSRNSDESAGKESSSSLSNNSSPSEHRKEFNIAYYILTEKQLEHNGYCLNQSGFLCTRPAPSGSPPCEMLALDCEMCVTCNGFELTRVTLVDVKGQVVLDKLVKPSNPIIDYNTRYSGITPEMLSDVTTGLEDIQEEFLKLVYKETILIGHSLENDLLALKISHHLVIDTAILYKHPRGGSYKTALRVLARRFLSKAIQDSGSGHDSIEDARTAMELALLKFKNGPDFGLPQQFMRKKLLTVLSEYGKTSSFIDDMSIVKRYASGTCHALPVFSDDEALSKAVKEVKNVKVHFVWTQFSEINSYFKKQADDEEKFNARLAELISLLTCQNNSSAKKRIKHSLPSGLKEILTRTDSRIHNLYTSLPTNTMLIVFTGQGDTAIIHRLRKMLTEQTKTALCREKLLKVLEEQQAQAEVALCFVGIKH*

Click here to download the sequence:
Link to NCBI Protein BLAST