Transcript Information: S_Transcript_11885.p1


Annotated TAIR IDAT5G25800.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:8979761-8982724 | Reverse length=567
E-Value3E-162
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5221310692592
Replicate 26.205159563051
Replicate 35.4751872748189
Condition 2: 8 Hour
Replicate 15.5812544970622
Replicate 24.7190618224423
Replicate 34.6628416635897
Condition 3: 24 Hour
Replicate 15.2478919323107
Replicate 25.2233003242363
Replicate 36.3547729067578


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11885.p1 GENE.S_Transcript_11885~~S_Transcript_11885.p1 ORF type:3prime_partial len:512 (+),score=92.10,RNase_T|PF00929.20|3.4e-10 S_Transcript_11885:892-2424(+)
ATGCTTTCCTCTGCAACTCCTTTCACTTTCTTTCTCTCTCCTCTCACCTCTCCCCTTTCTCCTCCTCCTACTCAGTTTAAACCCAGAATGAGCTGTTCCTCTGCCTCTACATCACCCAATAACCAAACCCTAACTCCAATTAATGACCACAATGACAATGAAAACAACTACTCTTCCAAAACTTACTTTGATATCTACGGCCCTCAGGCGAGAGCTGAGGTTGAATTGAAGAAACCAGAAGCTAATTCCACTTTGAGTTTGCAAGATGTACAAGGGCTAGTCACATGGGTGCTTGCTGATGGTTTCATGCCTTCTTGGGCTTTTATCAAAAACAAGCCTCTAATTCCGAAAGTGGTTCTTCTATATGTGCCAGGCCTTGATGCAGCATTATATATGTCACAGTTAAAATTGTTTACTGGTTTGAAAGAGTGCCTTGGCAACCCTAGGGCAGTTCAGGCTTTGAGCTGTGTGTTAGATGGCATTCAAACAATTGACACCCTTCTGACGTGCAAGCTCGAAAGGAAAAGGGATGAACCTGTTTTACTGTCCAGGAACTCTGACGAGTCAGCTGGGAAAGAATCTAGCTCGTCCTTGTCTAACAACTCATCTCCAAGTGAGCTTATGAAAGAGTTCAACATTGCCTATTATATTCTTACAGAAAAACAGCTGGAACATAATGGATATTGCCTCAATCAGTCTGGTTTTCTTTGTACCCGTCCGGCGCCTTCTGGTTCTCCCCCTTGTGAAATGTTAGCTCTTGACTGCGAGATGTGTGTCACATGCAATGGATTTGAGCTGACACGGGTGACGCTTGTAGATGTTAAAGGTCAGGTTGTGTTAGACAAGCTAGTTAAGCCGTCAAACCCAATTATTGATTACAACACTAGATATAGTGGAATCACACCTGAAATGCTGAGCAATGTCACTACAGGTCTTGAAGACATTCAGGAAGAATTTTTGAAGCTGGTCTACAAAGAGACCATTCTAATTGGACATTCGTTAGAGAATGACTTACTGGCATTGAAAATCTCGCATCATCTAGTTATTGACACTGCAATACTTTACAAGCATCCTCGTGGGGGCTCATATAAAACCGCTCTTCGGGTGCTTGCCAGGAGATTTCTTTCCAAAGCTATACAGGATTCAGGAAGTGGCCATGACAGCATAGAAGATGCAAGAACAGCTATGGAACTGGCTTTACTGAAGTTTAAAAATGGGCCTGACTTTGGCTTACCACAACAATTTACGCGGAAGAAGCTTCTTACTGTTTTGAGTGAATATGGAAAAACATCATCATTTATCGATGATATGTCCATTGTGAAGCGTTATGCTTCTGGGACATGCCATGCTTTGCCCGTCTTCTCTGACGATGAAGCACTCTCAAAAGCTGTAAAAGAGGTAAAAAATGTCAAGGTGCATTTTGTTTGGACTCAGTTCTCGGAAATAAATTCCTATTTTAAGAAGCAAGCGGATGATGAAGAAAAATTTAATGCAAGGCTTGCAGAGTTGATATCTTTGCTTACGTGTCAGAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11885.p1 GENE.S_Transcript_11885~~S_Transcript_11885.p1 ORF type:3prime_partial len:512 (+),score=92.10,RNase_T|PF00929.20|3.4e-10 S_Transcript_11885:892-2424(+)
MLSSATPFTFFLSPLTSPLSPPPTQFKPRMSCSSASTSPNNQTLTPINDHNDNENNYSSKTYFDIYGPQARAEVELKKPEANSTLSLQDVQGLVTWVLADGFMPSWAFIKNKPLIPKVVLLYVPGLDAALYMSQLKLFTGLKECLGNPRAVQALSCVLDGIQTIDTLLTCKLERKRDEPVLLSRNSDESAGKESSSSLSNNSSPSELMKEFNIAYYILTEKQLEHNGYCLNQSGFLCTRPAPSGSPPCEMLALDCEMCVTCNGFELTRVTLVDVKGQVVLDKLVKPSNPIIDYNTRYSGITPEMLSNVTTGLEDIQEEFLKLVYKETILIGHSLENDLLALKISHHLVIDTAILYKHPRGGSYKTALRVLARRFLSKAIQDSGSGHDSIEDARTAMELALLKFKNGPDFGLPQQFTRKKLLTVLSEYGKTSSFIDDMSIVKRYASGTCHALPVFSDDEALSKAVKEVKNVKVHFVWTQFSEINSYFKKQADDEEKFNARLAELISLLTCQN

Click here to download the sequence:
Link to NCBI Protein BLAST