Transcript Information: S_Transcript_119057.p1


Annotated TAIR IDAT3G49900.2
Annotated Gene NamePhototropic-responsive NPH3 family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:18500635-18502614 | Reverse length=520
E-Value5E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0388992881792
Replicate 23.0247372780464
Replicate 33.4208300800227
Condition 2: 8 Hour
Replicate 13.1816106521529
Replicate 22.1650176102961
Replicate 33.8677949283232
Condition 3: 24 Hour
Replicate 14.4042103811682
Replicate 22.1932720880336
Replicate 31.5255268793417


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_119057.p1 GENE.S_Transcript_119057~~S_Transcript_119057.p1 ORF type:3prime_partial len:248 (+),score=49.69,BTB|PF00651.27|2.4e-10 S_Transcript_119057:100-840(+)
ATGACGGGCTGGAGTGATTTAGGGGTTGTAGAAACCATTTTTGAGGAAGAAACTGAGGATTTGCAGTCCCTTTCTTCTTCATCTCCTCTTTCTCCCCCACTTTCCTCCACATCTTCCCCTCTTCAGTCTGCTGTAGATGCTTGGACGAATACTACAAGGAGGAAGCCAGATGTCAAAATACATGTTGAAGGCATATGCTTTTACTTGCACAAGGACCCTCTGATATCCAAAAGCAGTTACCTAAAGCGCAAATTAAATGGAGTAACAGAATACACCCTTTCACCGCCGTTGAAGATAACGGCAGAAACATTCAAACAGATAGTTGACTTTTGCTACAGTGGTCACACCATCATAACGCCATTTAATGTGGCGCCTCTTAGGACAGCGGCTGAGCTACTCAAGATGGACGTCGTTATGGAAGAAGATGATGATGATGACGGTAGCAATGAAGAGAGCCTCTGTCAAATAACAGAGTCTTACTTCTGTATGGTGGTGACTCTTAACAAAGACTTGGTTTGTAACGTTTTTCATTCCTGTTTGTCTTTGCTCCCTGAGGCGGAGCACACGGCGTTTCTTGCTAGCAGGTGTCTTGAAGCTCTCTTCTCGTTTGATGGTAGCAATGATGATGATGAGGAGGACGATGAGAATGGTTTAGCTAGTTGTGCTGATGGACTTAAGACAGTTTCACCGGAGAATTTTAGAGTCATTGCTGATTCCTTGCAAAGAAGGCTTACAGGAAGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_119057.p1 GENE.S_Transcript_119057~~S_Transcript_119057.p1 ORF type:3prime_partial len:248 (+),score=49.69,BTB|PF00651.27|2.4e-10 S_Transcript_119057:100-840(+)
MTGWSDLGVVETIFEEETEDLQSLSSSSPLSPPLSSTSSPLQSAVDAWTNTTRRKPDVKIHVEGICFYLHKDPLISKSSYLKRKLNGVTEYTLSPPLKITAETFKQIVDFCYSGHTIITPFNVAPLRTAAELLKMDVVMEEDDDDDGSNEESLCQITESYFCMVVTLNKDLVCNVFHSCLSLLPEAEHTAFLASRCLEALFSFDGSNDDDEEDDENGLASCADGLKTVSPENFRVIADSLQRRLTGS

Click here to download the sequence:
Link to NCBI Protein BLAST