Transcript Information: S_Transcript_119059.p1


Annotated TAIR IDAT3G49900.2
Annotated Gene NamePhototropic-responsive NPH3 family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:18500635-18502614 | Reverse length=520
E-Value3E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0292320919683
Replicate 21.0970447846278
Replicate 31.3246164037945
Condition 2: 8 Hour
Replicate 11.6494777040876
Replicate 20.61800686850074
Replicate 30.70660268303806
Condition 3: 24 Hour
Replicate 11.0862096763279
Replicate 20.87650100019023
Replicate 30.27869662326095


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_119059.p1 GENE.S_Transcript_119059~~S_Transcript_119059.p1 ORF type:3prime_partial len:181 (-),score=31.50,NPH3|PF03000.10|2.8e-08 S_Transcript_119059:3-542(-)
ATGCTTGGACGAATACTACAAGGAGGAAGCCAGATGTCAAAATACATGTTGAAGGCATATGCTTTTACTTGCACAAGGTGTCTTGAAGCGCTGTTCTCCTTGGATGGTAGCGATGATGATGAGGAGGACGAGGATGAGGACGAGAATGGTTTAGCTAGTTGTGCTGATGGACTTAAGACAGTTTCACCGGAGAATTTTAGAGTCATTGCTGATTCCTTGCAAAGAAGGCTTACAGGAAGTCATGATCTTCTGTATAGAGTGGTTGACCTTTACTTTCTGGTGTGCACTGGGAAGATAACGGAAGAGCAGAGGAGTCAAATATGCAGCTGCATAGACTGCGGCATTCTGTCATCTTCACTCCTGTTACACGCCGTCCAGAACCCCCGTATGCCCTTACGCTTCATAGTCCAAGCCATGCTCATTGAGCAGCTCAACACTCACCGCTCCATCTTCTCTGCCCTCAACAACGCCACTGCCACCACCACCAAAGCACCCAGGCCTCAGCCTCGGGACAAGGCCTCATCCCCATCCACACTGGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_119059.p1 GENE.S_Transcript_119059~~S_Transcript_119059.p1 ORF type:3prime_partial len:181 (-),score=31.50,NPH3|PF03000.10|2.8e-08 S_Transcript_119059:3-542(-)
MLGRILQGGSQMSKYMLKAYAFTCTRCLEALFSLDGSDDDEEDEDEDENGLASCADGLKTVSPENFRVIADSLQRRLTGSHDLLYRVVDLYFLVCTGKITEEQRSQICSCIDCGILSSSLLLHAVQNPRMPLRFIVQAMLIEQLNTHRSIFSALNNATATTTKAPRPQPRDKASSPSTLG

Click here to download the sequence:
Link to NCBI Protein BLAST