Transcript Information: S_Transcript_119316.p1


Annotated TAIR IDAT1G79740.1
Annotated Gene NamehAT transposon superfamily
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:30004367-30006715 | Reverse length=651
E-Value1E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.12981951822039
Replicate 20
Replicate 30.71971653009173
Condition 2: 8 Hour
Replicate 11.0402629422992
Replicate 20.76391678281993
Replicate 30.20795948882909
Condition 3: 24 Hour
Replicate 10.53280203635596
Replicate 20.33166553526362
Replicate 30.49213745180714


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_119316.p1 GENE.S_Transcript_119316~~S_Transcript_119316.p1 ORF type:3prime_partial len:205 (-),score=46.03 S_Transcript_119316:3-548(-)
ATGGATTCTAGTGATGCCAACCCTAATGCTAGTAGTAGTGGTAGTGTAACATCAAATGCATCAAATGATAAAGCTCCTTTGTGGGAATATGTTACAAAGCTTAATAGATCTTCTGAAACTGGGGGTACATGGAGATGGATTTGCAATTTTTGTAATGAAACAAAACAAGGGAGTTACTCTAGGGTGAGAGCTCATTTACTTCAAATACCAAGACAAGGAATTTCAGCTTGTAAAAAGGTGCTACGAAATGATTTGCTTGAGATGAAGAGGTTAGATGATCAATTTGAAAATGCTAAAAAACATTCTAGTAGTGTGGATGTTCCATTGCCTTGTGGTGGAACACAAATTGATTCCTCTAGTAAGAAAAGAAAATCCGACTTGGGACCTTTGCCTAAGGCTTTTGATGTAGATGCTAGAACACAATTGGATCAAGAAATTGCTAGAATGTTTTTTACTGGTGGTGTGCCATTTAACCTTGCTAGAAATCCACATTATGTGAGGTCATATACATTTGTGGCAAATCATAATTTGGGTGGTTATGTGCCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_119316.p1 GENE.S_Transcript_119316~~S_Transcript_119316.p1 ORF type:3prime_partial len:205 (-),score=46.03 S_Transcript_119316:3-548(-)
MDSSDANPNASSSGSVTSNASNDKAPLWEYVTKLNRSSETGGTWRWICNFCNETKQGSYSRVRAHLLQIPRQGISACKKVLRNDLLEMKRLDDQFENAKKHSSSVDVPLPCGGTQIDSSSKKRKSDLGPLPKAFDVDARTQLDQEIARMFFTGGVPFNLARNPHYVRSYTFVANHNLGGYVP

Click here to download the sequence:
Link to NCBI Protein BLAST