Transcript Information: S_Transcript_119378.p1


Annotated TAIR IDAT1G62440.1
Annotated Gene Nameleucine-rich repeat/extensin 2
Annotated Gene Symbol(s)LRX2
Annotation TypeHomolog
Chromosome Positionchr1:23111818-23115293 | Forward length=826
E-Value8E-133
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1492588596805
Replicate 24.0997903967029
Replicate 33.7097457639426
Condition 2: 8 Hour
Replicate 13.1048460998125
Replicate 22.7857665930694
Replicate 33.5934762245946
Condition 3: 24 Hour
Replicate 11.3809983815893
Replicate 21.6064387515802
Replicate 32.6574951001559


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_119378.p1 GENE.S_Transcript_119378~~S_Transcript_119378.p1 ORF type:3prime_partial len:522 (+),score=76.46,LRR_8|PF13855.2|8.8e-07,LRR_8|PF13855.2|1.5e+03,LRR_8|PF13855.2|0.00016,LRR_4|PF12799.3|0.00052,LRR_4|PF12799.3|3.2,LRR_4|PF12799.3|23,LRR_1|PF00560.29|2.1e+03,LRR_1|PF00560.29|9.3,LRR_1|PF00560.29|3,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|3.4e+03,LRR_1|PF00560.29|7.8e+02,LRR_1|PF00560.29|4.5 S_Transcript_119378:153-1715(+)
ATGGCTCCTTCTCCTCACATTTTCTCTCTCCTCTTTCTTCTCTCTCTCCTCCCCTTCACATTTGCTGATAATGGCCTTCACAAAGGCTGGTACAAGGACCGTGACCACGAAAATGAAGTTTATGGGCCAGAAGATGTGACCGCCGACCCGAAACTCCAGTTCGAGAATGACAAACTTCGCTTGGCTTACATTGGTCTTCAATCTTGGAAATCCGCAATGTTATCCGACCCAAATAACTTCACGGGTAATTGGGTTGGATCTGATGTTTGCTCTTATAATGGGGTCTTCTGTGCTTATCTTCCTGGTAGTGGCGGAGATGGGTATGGGTACGGGTATGGTCATGATGAGTACCATCATCCGGACCGGGTTGTTGCTTCGGTTGATCTTAACCATGCTGATATTGCTGGGTATCTCCCAGATGAGCTCGGATTGCTGTCTGATCTAGCTGTTTTTCACATCAACTCGAACCGGTTTTGTGGGACTGTCCCCAAGACTTTCGGTTCAATGAAGCTGTTGTACGAGTTGGATATCAGCAACAACCGGTTCGTGGGGAAGTTCCCTCCGGTTCTGCTGTCATTGCCGAGCTTGAAGTACTTGGACATCCGGTTCAATGACTTCGAGGGCCCGATCCCTCCGGCAGTTTTCAACAAACCGTTGGACGCTTTGTTTGTGAACAACAACCGGTTCAAGTACGGGATACCCTCCAACATGGGTAACTCCCCTGTATCGGTGTTGGTGATGGCCAACAACGATCTCGGGGGATGTATCCCCACAAGTATCGGGGATATGGGAAACACCCTGAATGAGATTATCTTGTTGAACGATAATCTCACAGGGTGTTTGCCCAAAGAAGTCGGGATGTTGAAGCATGTCACGGTGTTTGACATTAGCTTCAACAAACTGGTGGGAGCACTCCCGTATAGTATTGGTAAGATGAAGAGTGTTGAGCAACTTGATGTTGCTCACAACAGGTTCACTGGCAAGATCCCCGACTCGATCTGCCAGTTGCCCAACCTACAAAACTTTACTTACTCCTACAACTTCTTCAAGGGCGAGGCGCCAGCTTGTGTCGCCTTGTCCGGGAAGGGGGGAGTGGTTGTTGATGGGTCCGGAAATTGTATTCCCGGAAAGAAGGGACAACGGTCCGAGAGGATGTGCAAGTCCCCTCTTGCACATACCATCAATTGTTATGAATACGGGCATTGTGGGTGGAAGACTATCAAGGATTACGCCCCCAAAACCCCTCCTGCTCCTTACGGCATGGGTTCTAAAGGAGGGTACAAGGCACCCGCAACTGCACCGCCCCCTGGCTGGGATATGTCCTCGTCCTCGAGGTACCACTCTCCACCACCACCATCACCACCAACTGTTTACTATAGTCCACCACCATCACCCTCACCTGGTGAAGGCGTTTCGTCTAAAAGTTTCCCTCCATCACCGCCACCACCAACACCGGTATACTATCAACCATCACCGCCACCACCAACACCAGTATACTATCAACCATCACCACCACCTCCATGTGATGAAGAACACAAACCACCATCCTACACTAACTCACCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_119378.p1 GENE.S_Transcript_119378~~S_Transcript_119378.p1 ORF type:3prime_partial len:522 (+),score=76.46,LRR_8|PF13855.2|8.8e-07,LRR_8|PF13855.2|1.5e+03,LRR_8|PF13855.2|0.00016,LRR_4|PF12799.3|0.00052,LRR_4|PF12799.3|3.2,LRR_4|PF12799.3|23,LRR_1|PF00560.29|2.1e+03,LRR_1|PF00560.29|9.3,LRR_1|PF00560.29|3,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|3.4e+03,LRR_1|PF00560.29|7.8e+02,LRR_1|PF00560.29|4.5 S_Transcript_119378:153-1715(+)
MAPSPHIFSLLFLLSLLPFTFADNGLHKGWYKDRDHENEVYGPEDVTADPKLQFENDKLRLAYIGLQSWKSAMLSDPNNFTGNWVGSDVCSYNGVFCAYLPGSGGDGYGYGYGHDEYHHPDRVVASVDLNHADIAGYLPDELGLLSDLAVFHINSNRFCGTVPKTFGSMKLLYELDISNNRFVGKFPPVLLSLPSLKYLDIRFNDFEGPIPPAVFNKPLDALFVNNNRFKYGIPSNMGNSPVSVLVMANNDLGGCIPTSIGDMGNTLNEIILLNDNLTGCLPKEVGMLKHVTVFDISFNKLVGALPYSIGKMKSVEQLDVAHNRFTGKIPDSICQLPNLQNFTYSYNFFKGEAPACVALSGKGGVVVDGSGNCIPGKKGQRSERMCKSPLAHTINCYEYGHCGWKTIKDYAPKTPPAPYGMGSKGGYKAPATAPPPGWDMSSSSRYHSPPPPSPPTVYYSPPPSPSPGEGVSSKSFPPSPPPPTPVYYQPSPPPPTPVYYQPSPPPPCDEEHKPPSYTNSP

Click here to download the sequence:
Link to NCBI Protein BLAST