Transcript Information: S_Transcript_119440.p1


Annotated TAIR IDAT4G11130.1
Annotated Gene NameRNA-dependent RNA polymerase 2
Annotated Gene Symbol(s)RDR2, SMD1
Annotation TypeHomolog
Chromosome Positionchr4:6780522-6784390 | Forward length=1133
E-Value4E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.86312436438423
Replicate 20.83480825352759
Replicate 30.59814279190056
Condition 2: 8 Hour
Replicate 12.7665371222227
Replicate 22.9022938775862
Replicate 33.3414031380782
Condition 3: 24 Hour
Replicate 10.82656315910356
Replicate 21.4700850752225
Replicate 31.2270183764651


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_119440.p1 GENE.S_Transcript_119440~~S_Transcript_119440.p1 ORF type:internal len:185 (+),score=35.29 S_Transcript_119440:3-554(+)
TGCTTAAAAAAATCCCCCAAAATCCCTTTATGCAGAACCCAAAATTACCCCAAAAACAGTCTCTCATCAGTCATCACACATTCACACTCACTATACTCAATAATGGCAATAGGGGGCAGAACACAGAGAGAAAGACCCACAGTAAAGGTCTCAGGAATCCCTTACACAGCCATAGCACAAGACCTCTTTGACTTCCTAGAGTCAACAATTGGTAAAGGCACAGTCTTTGCCATTAATATCTTCACTGAGAGGAAAAACTGGAAGTCTAAAGGTTATGGGAGGGTTCAGTTTGAGACCCTTGAAGCTAAGTCTAAAGCAACCCAACTGGCTGCTCAAAACAAGCTCATCTTTAAAGGGTTCTCTCTTTCTTTCTCTTCTTCTAATGAGGATGTTGTTGTTAGGCCTGTTGATCCTAAACATAGGACTAGTCAAGGGGATTTGCATTTGGGTTTGTTGGAAAAGGAGGATTTGATGAGGGTTGTTGATACTTGGGAGAATGTTAGAGTTTGGGTTATGCCTGAGAGGAATTGTATTGAGTTTCAACTTGAGTTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_119440.p1 GENE.S_Transcript_119440~~S_Transcript_119440.p1 ORF type:internal len:185 (+),score=35.29 S_Transcript_119440:3-554(+)
CLKKSPKIPLCRTQNYPKNSLSSVITHSHSLYSIMAIGGRTQRERPTVKVSGIPYTAIAQDLFDFLESTIGKGTVFAINIFTERKNWKSKGYGRVQFETLEAKSKATQLAAQNKLIFKGFSLSFSSSNEDVVVRPVDPKHRTSQGDLHLGLLEKEDLMRVVDTWENVRVWVMPERNCIEFQLEF

Click here to download the sequence:
Link to NCBI Protein BLAST