Transcript Information: S_Transcript_11950.p1


Annotated TAIR IDAT3G63430.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74160.1); Has 135 Blast hits to 119 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 3; Plants - 119; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:23420414-23422201 | Forward length=540
E-Value2.3E-65
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.3015157234982
Replicate 26.7319793778058
Replicate 35.3200200241155
Condition 2: 8 Hour
Replicate 120.942626901185
Replicate 225.641580363994
Replicate 322.244999936481
Condition 3: 24 Hour
Replicate 12.6886010449962
Replicate 24.5037061465818
Replicate 35.0120729266577


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11950.p1 GENE.S_Transcript_11950~~S_Transcript_11950.p1 ORF type:complete len:780 (+),score=112.54,DUF4378|PF14309.2|1.2e-18,VARLMGL|PF14383.2|8.2e-06 S_Transcript_11950:106-2445(+)
ATGACGACAACAACAGGGATAGGAGTACATGACCAGAACTTAGAGAGACATATTGAGAAGCATATGGGCGGTTGTATGGCTGGTTTCTTCAACCTCTTTGATCGCTCTCATCTTCTCTCCTCCAAACGCCTCTATCCCAAACGCCTCCCCCCTCCTTCGGTTGGTGCCGATACGGCTTCGGAACCGGCGTCGTCAATCGGATCTCCGGCATTGTCTGGAGAATTCGACAAACCGAAACCACAACCTCAACCTCAGCCATATCCTCAATCCCCGAAACCGGAGCCGAAGACGCCGGTTACGGAATCGGAATCAGCGCAGAAGTCGCCGTTGGCGGTCTCGACATTCGAGTTCAAGGAAGGAGTGAAGTCGCCATGGAAGTTCAACCGAGAAGCTCCACGTCTCTCTCTGGATAGCCGCGCCGTGGTGGACGCTAAAGGCGGTCTCCGGCCGAGAGAGATCCGTATCAACACCAACGCCGCCGCAAACTCCGCCGCTGATGAGGAGAGAGAAAATCAACGCCGGTCCCCGAGTGTCATCGCTCGCCTCATGGGCCTCGAGCCGATCCTTACAAGCTCATCTTCGTCTTCGTTATCCTCCTCTGTTTCAGAACCGGAGAAGAAGGTGGAGCTTCGTAGATCGGCTTCGGAGTCCAGATCGAGGGACTACCGGTTCTTCGACACTCCGAGCTTTCTCTCTCCTGTCATTATGGAAACAGGAGAGAGAAAGTCGAATCAATCTGTGAATCAGAGCAACAACATCAATGCAGCAGCGAAGAAGAGCAACAACATGAATTCAAAGGTGGCAAGGAATCAAGGTAATCAGGCTAATCACAGGAGATTGATGGTGGAGAGAAAGAGCTACTACGACACGGCTGATTTCTTTCCACCGGAGCTCCCGGCGAAGTACCAGCAGCAACAAAACCAGGCGGTGACGATATACGGAGAAATCGAGAGGCGGTTGAGAATGAGAGGCATTGATGAGCCTTCAAGGGATCTAGAAACTCTAAAGCACATTCTAGAAGCTCTTCAGCTCAAAGGCCTCCTTCATTCCTCCTCATCATCTGGTGGTCCTGCTCCTCCTAACCACCACAACAGCAACCGTCATCCTCGCCAGCATGTCGTTTTCGAAGAATCTCCAATTGTCCTAATGAAGCCGGCGAGGCCTCCAGTGAATCGCCGGCGAGGTAATGAGCCGTCGGTGAGTCCGAGAAGAGAGAGGCCGGCGAGGAGTACAATGAGGTCACCGGGGAGGAGCAGCTCCGAGAACCGGAGCTCGAGCCCCGTGGTGAGGAAAAAGGGAGGTCCATTGAGTGTTGAAACGCAGAGACGAGGGAATGAAACGACAACCACAACGAGAAGCTCGTATTCTCCTGTTCAGTCACCGAGGATGGTGAGAAAGTCAGATCAGACGGTGAGTCGGTCGCCTCGGAATCGGAGATCAACGGTCGAGATTTGTCATGGGGAGAGAGAAAGAGGTGGTTTCAGTGGTCCTGAGGATGAAGCATCTACTCTCTCCGAGAGCAGCTTCAGTGCCGACAATGAGAGATGGCGAGTAGAGGAATACGGAGAAGGGAGGAATTTATTGGAAAGATGTGACAAGCTTCTACACAGCATTGCAGAAATGACATCAAACTCGACCGAGTTGCAGCAACCGAGTCCAGTCTCGGTGCTCGACTCGTCGTTCTATAAAGAGGATGAATCATCACCTTCCCCTGTCAAGAAGCGTACAATTGATTTCAAAGATCATGTAGTGATGGAGTTGGAAGATGAGGTCTGGAGCCCATCATCATCAAACCAATTATTATCAAAGGCTGACCATGACATAGATTCATCAGATGACTCTGATTTCAGCTATGTCTCAGAGGTACTCAGAGCATCTAATTACCTCCCAGATGACACTGACCTTTTCCTACTACTAGAGAATCAAAGTTCAATAAGAGGCAAAGACAAGTCCAAGGTCTCAATCCTTCAAAGGAAGCTAATCTTTGACACTATTACTGAAATCCTTGACCGGAACCGTCAGCTCCCGCCTTGGAAGGCCGTCACTTCGGCCTCTTTTGGGAGGCCGATGTTGGAGCAGATCTGGTCCGAGTTCCAAAAGATCCGGGAGCGAGGCCCCTCAGATGACCTCTTTGAGGTCATACGCGGGGTGCTAAAGAAAGACCTGGCAGGAGATTCGATCAACGGATGGGGTGATTGCCACGTGGAGATGTCGGATGCAGTTCTCGACATCGAACGGCTGATATTCAAGGATTTGATCGGAGAGACCATCCGGGATCTCGCTGCCTTTGCTGGCGAAAGTGTTGGAGCTCAAGCACCTCGTAGGAAGTTAGTTTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11950.p1 GENE.S_Transcript_11950~~S_Transcript_11950.p1 ORF type:complete len:780 (+),score=112.54,DUF4378|PF14309.2|1.2e-18,VARLMGL|PF14383.2|8.2e-06 S_Transcript_11950:106-2445(+)
MTTTTGIGVHDQNLERHIEKHMGGCMAGFFNLFDRSHLLSSKRLYPKRLPPPSVGADTASEPASSIGSPALSGEFDKPKPQPQPQPYPQSPKPEPKTPVTESESAQKSPLAVSTFEFKEGVKSPWKFNREAPRLSLDSRAVVDAKGGLRPREIRINTNAAANSAADEERENQRRSPSVIARLMGLEPILTSSSSSSLSSSVSEPEKKVELRRSASESRSRDYRFFDTPSFLSPVIMETGERKSNQSVNQSNNINAAAKKSNNMNSKVARNQGNQANHRRLMVERKSYYDTADFFPPELPAKYQQQQNQAVTIYGEIERRLRMRGIDEPSRDLETLKHILEALQLKGLLHSSSSSGGPAPPNHHNSNRHPRQHVVFEESPIVLMKPARPPVNRRRGNEPSVSPRRERPARSTMRSPGRSSSENRSSSPVVRKKGGPLSVETQRRGNETTTTTRSSYSPVQSPRMVRKSDQTVSRSPRNRRSTVEICHGERERGGFSGPEDEASTLSESSFSADNERWRVEEYGEGRNLLERCDKLLHSIAEMTSNSTELQQPSPVSVLDSSFYKEDESSPSPVKKRTIDFKDHVVMELEDEVWSPSSSNQLLSKADHDIDSSDDSDFSYVSEVLRASNYLPDDTDLFLLLENQSSIRGKDKSKVSILQRKLIFDTITEILDRNRQLPPWKAVTSASFGRPMLEQIWSEFQKIRERGPSDDLFEVIRGVLKKDLAGDSINGWGDCHVEMSDAVLDIERLIFKDLIGETIRDLAAFAGESVGAQAPRRKLVF*

Click here to download the sequence:
Link to NCBI Protein BLAST