Transcript Information: S_Transcript_119529.p1


Annotated TAIR IDAT3G52980.1
Annotated Gene NameZinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19645660-19646962 | Forward length=381
E-Value4.5E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.4718320296633
Replicate 23.8764527446848
Replicate 34.1366884673497
Condition 2: 8 Hour
Replicate 19.0483431812882
Replicate 28.9905559954042
Replicate 35.099866342874
Condition 3: 24 Hour
Replicate 13.919829560929
Replicate 24.4480377860121
Replicate 34.0543847081121


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_119529.p1 GENE.S_Transcript_119529~~S_Transcript_119529.p1 ORF type:5prime_partial len:535 (-),score=143.62,RRM_1|PF00076.18|1.5e-07,zf-CCCH|PF00642.20|1.3e-05 S_Transcript_119529:383-1987(-)
AGCAGTAGAGAGAATTTTGTTGATGAGTACCATTTGCAAGACCAAAATCTCTCCTTTCTAAATGACCCACTTGCTATACCTTCTAGAAATGGCGACTTTTTTGAGCAAGGTATGGACTTGAGTATGAGTCCTGGTTGTAGGAGTGATTCTATGCTAAACCCATATTGCTGGGATAACTCAGATGGTGGTGGTGTTGAGAGTCATTTTCACAGGAGGAGTTCTTCATTCAATGATGTTTATTATGGGACTGCTGATTCAACTTCTGGGTGTGGTTTCAAGCCTTGTCTTTACTTTGCTAAGGGCTTCTGCAAGAATGGTAGTACTTGTAAATTTGTTCATGGTGCTGGGTTTGGAGATTCTGGTGATAATTCTGGGCCCATTGTTGGTTCTCCTTGCCAATACGATGCTTTTGAGCAGTGCCAAGAAGAGATGCTAAGGGCAAAGTTAGTTCAGCAACAAAGATTGGCTGCTGCTCAGTTGATGGCTAGTGGGATGAATTTACCTTATAAGAAGTTTAATTTTCTTCAAAGTGAGGCTCAGAGATCTGCAGCTGCATCGTTGACGATGGGTGAGGAGTTTCACAAGTTGAACCGTGTGAGGATGTCGAGGAATGAGTTTTCTGGAATGGGTTTGAGAGGAGATTCAAATCCTGGTTCTAGACAAATTTACTTGACTTTCCCAGCTGATAGCACCTTCAAAGAAGAGGATGTTTCTCAGTATTTTAGCAACTTTGGACCAGTTCAAGATGTGAGGATTCCATATCAACAGAAGAGAATGTTTGGTTTTGTTACATTTGTGTATCCTGAGACTGTCAATATGATTTTGGCCAAAGGAAACCCCCACTTTGTTTGTGATTCTCGTGTCCTTGTCAAACCTTACAAGGAGAAAGGAAAAATTCCTTACAAGAAGCAACAACAGCAGCAGCAACTAGAAAGGGGAGATTTCTCATGCTCTAGTCCTTCTGGACTTGATTCTAGAGAGCCTTTTGACTTCCAGCTTGGGGGGAGAATGTTCTACAGTACACAAGAGATGTTGTTGAAGAAAAAGCTCGAGGAACAAGCTGATTTGCAGCAGGCCCTTGAACGACAACGTAGGAGGCTGATGAATTTGCAGCTCATGGATTTGAAGAATCATCTATATCACCAGCAGGCTGTCGGGTCTCCGGTACTATCTCCTAATCTGTCTCAATTGTCGTCAAATCTTAGTGCTCCTGACCTGTCTAATGGGACGAGCGAGGATATTTCAGAAGGAAGCGAAGAAAGTTCAACTGGAGCACCTGATCTGCAGTTAGGTGAGGGGGATAAGGCAGCTCCAGTTGTTGAGGGAAATGGCAATGTCCAAAACAAAGAGAGTCATTCCGTCGATGATGAATGTGAACTTCCTGAGAGCTTAGAACATATCCTTCCAGACAACCTCTTTGCCTCTCCTACTAAGAAGTGCTCTGAACGCCGTTCATCGATTTTCTCTTCTGCATTCACGGAGCACAATGATGGCGCCGCAATCACCAGCCCATCGGTTGCTAATGGTGACTCGTCAATACCTGCCGCATCACCACTCATGGCTCCTCATAAATCTTGTTTCTTTGAGATGCCTAGGTATATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_119529.p1 GENE.S_Transcript_119529~~S_Transcript_119529.p1 ORF type:5prime_partial len:535 (-),score=143.62,RRM_1|PF00076.18|1.5e-07,zf-CCCH|PF00642.20|1.3e-05 S_Transcript_119529:383-1987(-)
SSRENFVDEYHLQDQNLSFLNDPLAIPSRNGDFFEQGMDLSMSPGCRSDSMLNPYCWDNSDGGGVESHFHRRSSSFNDVYYGTADSTSGCGFKPCLYFAKGFCKNGSTCKFVHGAGFGDSGDNSGPIVGSPCQYDAFEQCQEEMLRAKLVQQQRLAAAQLMASGMNLPYKKFNFLQSEAQRSAAASLTMGEEFHKLNRVRMSRNEFSGMGLRGDSNPGSRQIYLTFPADSTFKEEDVSQYFSNFGPVQDVRIPYQQKRMFGFVTFVYPETVNMILAKGNPHFVCDSRVLVKPYKEKGKIPYKKQQQQQQLERGDFSCSSPSGLDSREPFDFQLGGRMFYSTQEMLLKKKLEEQADLQQALERQRRRLMNLQLMDLKNHLYHQQAVGSPVLSPNLSQLSSNLSAPDLSNGTSEDISEGSEESSTGAPDLQLGEGDKAAPVVEGNGNVQNKESHSVDDECELPESLEHILPDNLFASPTKKCSERRSSIFSSAFTEHNDGAAITSPSVANGDSSIPAASPLMAPHKSCFFEMPRYM*

Click here to download the sequence:
Link to NCBI Protein BLAST