Transcript Information: S_Transcript_119530.p1


Annotated TAIR IDAT3G52980.1
Annotated Gene NameZinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19645660-19646962 | Forward length=381
E-Value8.1E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.666330936606
Replicate 23.0862881422611
Replicate 32.056940319343
Condition 2: 8 Hour
Replicate 14.2328279457447
Replicate 24.102210431103
Replicate 34.8756475618199
Condition 3: 24 Hour
Replicate 11.5691976798536
Replicate 22.0564517120315
Replicate 31.5257191322565


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_119530.p1 GENE.S_Transcript_119530~~S_Transcript_119530.p1 ORF type:5prime_partial len:529 (-),score=135.90,RRM_1|PF00076.18|3.2e-07,zf-CCCH|PF00642.20|1.3e-05 S_Transcript_119530:383-1969(-)
AGCAGTAGAGAGAATTTTGTTGATGAGTACCATTTGCAAGACCAAAATCTCTCCTTTCTAAATGACCCACTTGCTATACCTTCTAGAAATGGCGACTTTTTTGAGCAAGGTATGGACTTGAGTATGAGTCCTGGTTGTAGGAGTGATTCTATGCTAAACCCATATTGCTGGGATAACTCAGATGGTGGTGGTGTTGAGAGTCATTTTCACAGGAGGAGTTCTTCATTCAATGATGTTTATTATGGGACTGCTGATTCAACTTCTGGGTGTGGTTTCAAGCCTTGTCTTTACTTTGCTAAGGGCTTCTGCAAGAATGGTAGTACTTGTAAATTTGTTCATGGTGCTGGGTTTGGAGATTCTGGTGATAATTCTGGGCCCATTGTTGGTTCTCCTTGCCAATACGATGCTTTTGAGCAGTGCCAAGAAGAGATGCTAAGGGCAAAGTTAGTTCAGCAACAAAGATTGGCTGCTGCTCAGTTGATGGCTAGTGGGATGAATTTACCTTATAAGAAGTTTAATTTTCTTCAAAGTGAGGCTCAGAGATCTGCAGCTGCATCGTTGACGATGGGTGAGGAGTTTCACAAGTTGAACCGTGTGAGGATGTCGAGGAATGAGTTTTCTGGAATGGGTTTGAGAGGAGATTCAAATCCTGGTTCTAGACAAATTTACTTGACCTTCCCAGCTGATAGCACTTTCAAAGAACAGGACGTTTCTCAGTATTTTAGCAACTTTGGACCTGTTCAAGATGTGAGAATTCCGTATCAACAAAAGAGAATGTTTGGTTTTGTTACATTTGTGTATCCTGAAACTGTCAATATAATTTTGGCCAAAGGAAACCCTCACTTTGTTTGTGATTCTCGCGTCCTCGTCAAGCCTTACAAGGAGAAGGGGAAACTTTCTGACAAGAAGCAACAGCTGCAGCAACTGGGAAGGGGAGATTTCTCATGCCCTAGCTCTTCTGAACTTGATTGTAGAGAGCCTTTTGAATATGAGCTTGGGGGGAGAGTGTTTTACAATGCTCAAAAGATGCTGCTAAAGAAAAAGCTTGAGGAGGAAGCTCTTGAGCTACAAGGTAGGAGGCTGATGAATTTGCAGCTCATGGATTTGAAGAATCATCTATATCACCAGCAGGCTGTCGGGTCTCCGGTACTATCTCCTAATCTGTCTCAATTGTCGTCAAATCTTAGTGCTCCTGACCTGTCTAATGGGACGAGCGAGGATATTTCAGAAGGAAGCGAAGAAAGTTCAACTGGAGCACCTGATCTGCAGTTAGGTGAGGGGGACAAGGCATCTCCAGCTGTTAAGGGACATGGCGATGTCCAAAACAAAGTGACCAATTCTGTCAATGATGAATGTGAACTTCCTGAAAGCTTAGAACATATCCTTCCAGACAACCTCTTTGCCTCTCCTACTAAGAAGTGCTCTGAACGCCGTTCATCGATTTTCTCTTCTGCATTCACGGAGCACAATGATGGCGCCGCAATCACCAGCCCATCGGTTGCTAATGGTGACTCGTCAATACCTGCCGCATCACCACTCATGGCTCCTCATAAATCTTGTTTCTTTGAGATGCCTAGGTATATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_119530.p1 GENE.S_Transcript_119530~~S_Transcript_119530.p1 ORF type:5prime_partial len:529 (-),score=135.90,RRM_1|PF00076.18|3.2e-07,zf-CCCH|PF00642.20|1.3e-05 S_Transcript_119530:383-1969(-)
SSRENFVDEYHLQDQNLSFLNDPLAIPSRNGDFFEQGMDLSMSPGCRSDSMLNPYCWDNSDGGGVESHFHRRSSSFNDVYYGTADSTSGCGFKPCLYFAKGFCKNGSTCKFVHGAGFGDSGDNSGPIVGSPCQYDAFEQCQEEMLRAKLVQQQRLAAAQLMASGMNLPYKKFNFLQSEAQRSAAASLTMGEEFHKLNRVRMSRNEFSGMGLRGDSNPGSRQIYLTFPADSTFKEQDVSQYFSNFGPVQDVRIPYQQKRMFGFVTFVYPETVNIILAKGNPHFVCDSRVLVKPYKEKGKLSDKKQQLQQLGRGDFSCPSSSELDCREPFEYELGGRVFYNAQKMLLKKKLEEEALELQGRRLMNLQLMDLKNHLYHQQAVGSPVLSPNLSQLSSNLSAPDLSNGTSEDISEGSEESSTGAPDLQLGEGDKASPAVKGHGDVQNKVTNSVNDECELPESLEHILPDNLFASPTKKCSERRSSIFSSAFTEHNDGAAITSPSVANGDSSIPAASPLMAPHKSCFFEMPRYM*

Click here to download the sequence:
Link to NCBI Protein BLAST