Transcript Information: S_Transcript_11960.p1


Annotated TAIR IDAT1G09060.3
Annotated Gene NameZinc finger, RING-type;Transcription factor jumonji/aspartyl beta-hydroxylase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:2921235-2925254 | Reverse length=944
E-Value2E-162
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.265047344638
Replicate 212.852777717306
Replicate 312.237703382576
Condition 2: 8 Hour
Replicate 118.867323520454
Replicate 218.085653339592
Replicate 317.43118378912
Condition 3: 24 Hour
Replicate 114.767413450028
Replicate 214.156056763419
Replicate 312.139582120219


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11960.p1 GENE.S_Transcript_11960~~S_Transcript_11960.p1 ORF type:complete len:642 (+),score=130.46,JmjC|PF02373.18|6.7e-08 S_Transcript_11960:1902-3827(+)
ATGCATGTTTTACTGAAAGAGCTGTGCATCAGTGATTGCTGCAGAGTACCTATTGTTGACTACCACCGGCATTGTTCAAGCTGCTCGTATGATCTCTGCCTTAGTTGCTGTCAAGATCTTCGTAATTCATCATTGAGTGGTGCAGAAGATAATGTGGGGGATGATCACACTTCAGAAAAAGGTCTGTTAAAAGAATCTCTGAAGAAGCTTCAGGGTTCATCAAATCATAGGCTTCCTTTGAGCATGAAGTTTCCTGGCTGGAAAGCCAATAAAGATGGCAGTGTACCGTGCCGTCCAAGGGATCATGGCGGCTGTGGTTGCCCTTATCTGACTCTTCAGCGGATATTTAAGATGAATTGGGTTGCCAAACTGGTAAAAAATTTGGAGGAAATGGTAAGTGGTTGCAAGGTTAACGCCTCCAGTTCATCCCCAGAGACCGGCTCACTTAAGTCTAGGTTTCTTGAGTGTGCATACCGTAAGGACAGTGATGACAACTTGTTGTATTGTCCATCAGCTCAAGAAATCAAAGGGGATGAGGTAGATTACTTCAGAAAGCATTGGGCGAAGGGTGAACCTGTCATTGTCAAGCAGGTCTCTGATTTTTCATCAAGCTTAAGTTGGGACCCCATGGTTATATGGAGAGAAATTTGTGAAACGACAGATGAGAGGATGAAAGATGCTGACAGAATGGTGAAAGCTGTTGATTGTTTGGATTGGTCTGAGGTCGATATAGAACTTGTCCAGTTCATGAAAGGGTACTCAGAGGGACGCATCCATGAAAATGGTTGGCCACAAATGTTGAAGCTGAAGGATTGGCCATCTCCAAGTGCTGCTGAAGAGTTCCTCTTGTACCAAAGACCTGACTTTATCAGTAAAGTCCCTTTTCTTGAATTTATTCATTTGAAGTGGGGGCTTCTGAACGTTGCTGCTAAATTGCCCCATTATTCCTTGCAAAATGATGTAGGCCCTAAGATTTTTATCTCTTATGGCCTATGTGAAGAGTTAGGTAGAGGTGACTCAGTGAGCAAGCTCCATTTGAACATGCGAGATATGGTATATCTATTGGTACATTCTTGTGACGTGAAACTCAAAGGCTGGCAGCGGGCAAATATTGAGAAGATACAAAAAGCTTCTGGCGAACCTGAGGTGCAACCGTTATCTGGAGATCCACACAGAGGCGTAAATGAGCAAAACTCACTTGTTTCTCCCATTGACAGAAATGATAAAAGAGAGGTTTATAAACTAGATATAAATCTAGATGAGCAAATAGAGGAGGCTGAATGCCGAAATATTGACCTTGAACGTGAGAACACCGAGACAGATGTTCATTCTTGTGATAATCGTCCAGGGGCTGTTTGGGATGTTTTTCGAAGAGAGGATATTCCAAAGTTAGCTGAGTATCTAAGAGCACATTGGAATGAGTTCGGAAATTCAGATGCTGTCCTTACTAGTCCTGCTACACACCTTCTTTATGATGACGCAGTGTATCTCTATGAACACCATAAAAAGAGGCTGAAGGAAGAATTTGGGGTTGAGCCATGGTCATTTGAGCAATACTTGGGCCAAGCAGTTTTTGTCCCTGCTGGATGTCCATTCCAAGTTAGAAATCTCCAGTCAACTGTGCAATTAGGCCTTGATTTCTTGTCTTCCGAGAGCTTAGAGCAGGCAGTAAAATTGGCTGAGGAGATACGTTGTCTTCCAAATGATCATGCTGCAAAGCTTCAAATGGTGGAGGTTGGGAAGATATCACTCTATGCAGCTAGTTCGGCAATTAAAGAAGTTCAGAAATTGGTGCTAGATGAAAAGCTTGGTGCTGAGCTTGCGTTTGAGGACCGTAATCTGACTGCAATGGTCTCGGAGAACCTCGAGAGAATTATAAAACAAAGCAACTATACCCTCCTATCGGATAAAGTACATCCAGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11960.p1 GENE.S_Transcript_11960~~S_Transcript_11960.p1 ORF type:complete len:642 (+),score=130.46,JmjC|PF02373.18|6.7e-08 S_Transcript_11960:1902-3827(+)
MHVLLKELCISDCCRVPIVDYHRHCSSCSYDLCLSCCQDLRNSSLSGAEDNVGDDHTSEKGLLKESLKKLQGSSNHRLPLSMKFPGWKANKDGSVPCRPRDHGGCGCPYLTLQRIFKMNWVAKLVKNLEEMVSGCKVNASSSSPETGSLKSRFLECAYRKDSDDNLLYCPSAQEIKGDEVDYFRKHWAKGEPVIVKQVSDFSSSLSWDPMVIWREICETTDERMKDADRMVKAVDCLDWSEVDIELVQFMKGYSEGRIHENGWPQMLKLKDWPSPSAAEEFLLYQRPDFISKVPFLEFIHLKWGLLNVAAKLPHYSLQNDVGPKIFISYGLCEELGRGDSVSKLHLNMRDMVYLLVHSCDVKLKGWQRANIEKIQKASGEPEVQPLSGDPHRGVNEQNSLVSPIDRNDKREVYKLDINLDEQIEEAECRNIDLERENTETDVHSCDNRPGAVWDVFRREDIPKLAEYLRAHWNEFGNSDAVLTSPATHLLYDDAVYLYEHHKKRLKEEFGVEPWSFEQYLGQAVFVPAGCPFQVRNLQSTVQLGLDFLSSESLEQAVKLAEEIRCLPNDHAAKLQMVEVGKISLYAASSAIKEVQKLVLDEKLGAELAFEDRNLTAMVSENLERIIKQSNYTLLSDKVHPV*

Click here to download the sequence:
Link to NCBI Protein BLAST