Transcript Information: S_Transcript_11961.p1


Annotated TAIR IDAT1G09060.3
Annotated Gene NameZinc finger, RING-type;Transcription factor jumonji/aspartyl beta-hydroxylase
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:2921235-2925254 | Reverse length=944
E-Value5.3E-251
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.032527084341
Replicate 211.745657750044
Replicate 311.437150002924
Condition 2: 8 Hour
Replicate 118.072884743585
Replicate 217.382443547414
Replicate 316.193910122921
Condition 3: 24 Hour
Replicate 114.804230394345
Replicate 214.543971169857
Replicate 313.645307476725


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11961.p1 GENE.S_Transcript_11961~~S_Transcript_11961.p1 ORF type:3prime_partial len:695 (+),score=128.03,WRC|PF08879.6|3.5e-14,WRC|PF08879.6|3.1e+03,zf-4CXXC_R1|PF10497.5|8.1e+03,zf-4CXXC_R1|PF10497.5|4.4e-08,zf-4CXXC_R1|PF10497.5|1.6e+03 S_Transcript_11961:247-2328(+)
ATGGACAATCCTCGTTCCGCTGTGGCGAACGGGGATGATAATGTCGGAATCCCGGATGATTTGCGGTGTAAGAGGTCTGATGGTAAGCAATGGAGATGTACAGCAATGTCAATGCCAGACAAAACTGTGTGTGAGAAGCATTACATTCAGGCAAAAAAGAGGGCGGCAAACTCCGCTTTACGAGCTAGTATGAAGAAAGCCAAGAGGAAGTCTGTAGGTGATGAAAGCCAGGTTTGTTTGGAGATTAAGAGTGAAGACAAGGATGCGGCACTTATGGATTTAGATTTGCAGGATTATCCGGTCTTAGGTTCAGGGAACATGTCTAAGGATAGGTTAATGAAGGGTCAAGTTCGGTATTCTCCGGAGTCGTCACCACTGAAAAGCATGTCTGTCCGTAATTCGTTGGATCTGGAGGATGATGTGCAAATGGACGGTTCCCCCTTTGATGATGGCCAGCAGTCCTATAGGGCATCGCCTGCTTACGGTATTGAGTCTTCGAGGAACATGTTACATAAAGGCATTGAAAATGGCAATATGGCCACAAGTGAGGATCACTCCGATCCAAGCACAGATTCTTCTGATGACACGGGTGGACTAACATGCCATCAATGCCGACGGAGTGACAAAGGCTCAGTTATTTGGTGCCTAAAATGTGATAGGAGAGGGTATTGTGGTAGCTGCATCAGTACATGGTATACAAACCTTCCGTTGGAAGAGATCCAAAGAGTTTGCCCTGCATGTCGTGGCTGTTGTAATTGCAAGGTCTGCTCTAGGGGAGATAATTTGATAAAGGCAAGAATACGAGAGATACCTGTGCTGGATAAGTTGCGATATCTTTATTGTTTGTTATCTTCGGTGCTTCCCGTAGTTAGGCAGATCCACCAGCAGCAGTGTGCTGAAGTGGAGTTGGAGAAGCAGCTTCGTGGAGTTGAAGTCGACCTTGAGAGAATGAAACTGAATGCAGATGAGCAAATGTGCTGTGATTGCTGCAGAGTACCTATTGTTGACTACCACCGGCATTGTTCAAGCTGCTCGTATGATCTCTGCCTTAGTTGCTGTCAAGATCTTCGTAATTCATCATTGAGTGGTGCAGAAGATAATGTGGGGGATGATCACACTTCAGAAAAAGGTCTGTTAAAAGAATCTCTGAAGAAGCTTCAGGGTTCATCAAATCATAGGCTTCCTTTGAGCATGAAGTTTCCTGGCTGGAAAGCCAATAAAGATGGCAGTGTACCGTGCCGTCCAAGGGATCATGGCGGCTGTGGTTGCCCTTATCTGACTCTTCAGCGGATATTTAAGATGAATTGGGTTGCCAAACTGGTAAAAAATTTGGAGGAAATGGTAAGTGGTTGCAAGGTTAACGCCTCCAGTTCATCCCCAGAGACCGGCTCACTTAAGTCTAGGTTTCTTGAGTGTGCATACCGTAAGGACAGTGATGACAACTTGTTGTATTGTCCATCAGCTCAAGAAATCAAAGGGGATGAGGTAGATTACTTCAGAAAGCATTGGGCGAAGGGTGAACCTGTCATTGTCAAGCAGGTCTCTGATTTTTCATCAAGCTTAAGTTGGGACCCCATGGTTATATGGAGAGAAATTTGTGAAACGACAGATGAGAGGATGAAAGATGCTGACAGAATGGTGAAAGCTGTTGATTGTTTGGATTGGTCTGAGGTCGATATAGAACTTGTCCAGTTCATGAAAGGGTACTCAGAGGGACGCATCCATGAAAATGGTTGGCCACAAATGTTGAAGCTGAAGGATTGGCCATCTCCAAGTGCTGCTGAAGAGTTCCTCTTGTACCAAAGACCTGACTTTATCAGTAAAGTCCCTTTTCTTGAATTTATTCATTTGAAGTGGGGGCTTCTGAACGTTGCTGCTAAATTGCCCCATTATTCCTTGCAAAATGATGTAGGCCCTAAGATTTTTATCTCTTATGGCCTATGTGAAGAGTTAGGTAGAGGTGACTCAGTGAGCAAGCTCCATTTGAACATGCGAGATATGGTATATCTATTGGTACATTCTTGTGACGTGAAACTCAAAGGCTGGCAGCGGGCAAATATTGAGAAGATACAAAAAGCTTCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11961.p1 GENE.S_Transcript_11961~~S_Transcript_11961.p1 ORF type:3prime_partial len:695 (+),score=128.03,WRC|PF08879.6|3.5e-14,WRC|PF08879.6|3.1e+03,zf-4CXXC_R1|PF10497.5|8.1e+03,zf-4CXXC_R1|PF10497.5|4.4e-08,zf-4CXXC_R1|PF10497.5|1.6e+03 S_Transcript_11961:247-2328(+)
MDNPRSAVANGDDNVGIPDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKKRAANSALRASMKKAKRKSVGDESQVCLEIKSEDKDAALMDLDLQDYPVLGSGNMSKDRLMKGQVRYSPESSPLKSMSVRNSLDLEDDVQMDGSPFDDGQQSYRASPAYGIESSRNMLHKGIENGNMATSEDHSDPSTDSSDDTGGLTCHQCRRSDKGSVIWCLKCDRRGYCGSCISTWYTNLPLEEIQRVCPACRGCCNCKVCSRGDNLIKARIREIPVLDKLRYLYCLLSSVLPVVRQIHQQQCAEVELEKQLRGVEVDLERMKLNADEQMCCDCCRVPIVDYHRHCSSCSYDLCLSCCQDLRNSSLSGAEDNVGDDHTSEKGLLKESLKKLQGSSNHRLPLSMKFPGWKANKDGSVPCRPRDHGGCGCPYLTLQRIFKMNWVAKLVKNLEEMVSGCKVNASSSSPETGSLKSRFLECAYRKDSDDNLLYCPSAQEIKGDEVDYFRKHWAKGEPVIVKQVSDFSSSLSWDPMVIWREICETTDERMKDADRMVKAVDCLDWSEVDIELVQFMKGYSEGRIHENGWPQMLKLKDWPSPSAAEEFLLYQRPDFISKVPFLEFIHLKWGLLNVAAKLPHYSLQNDVGPKIFISYGLCEELGRGDSVSKLHLNMRDMVYLLVHSCDVKLKGWQRANIEKIQKAS

Click here to download the sequence:
Link to NCBI Protein BLAST