Transcript Information: S_Transcript_119680.p1


Annotated TAIR IDAT4G13600.1
Annotated Gene NameCarbohydrate-binding X8 domain superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:7911179-7912892 | Reverse length=231
E-Value5.2E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.2580912459583
Replicate 27.0199784955729
Replicate 33.7723778352819
Condition 2: 8 Hour
Replicate 12.4233398087651
Replicate 21.9321142007037
Replicate 34.4569499537688
Condition 3: 24 Hour
Replicate 12.3830781989739
Replicate 20.72112127742924
Replicate 32.6368500968985


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_119680.p1 GENE.S_Transcript_119680~~S_Transcript_119680.p1 ORF type:complete len:220 (+),score=27.45,X8|PF07983.9|2.3e-20,X8|PF07983.9|1.6e+04 S_Transcript_119680:247-906(+)
ATGGATGAAGAAGGTCCTACTGCTGCTACTAGTTCTACTGCTAATACCAATAGAACTAGTAGTATAAACCATCAAAGAAGATTGATGATGGTGGTGGTGTTAGCGGTGTTAATAAGCGCTAGCTATCAAGTGAAGATGGTGAAGGCTCTATGGTGTGTGGCTAGGAGCGATGCGAGTGAGGAAGCTCTACAAAGGGGGCTTGATTACGCCTGTGCGGCTGGAGCTGATTGTGCTCCTATTCTTGACAAGGGCTTGTGTTTCCTTCCTAACACTTTGCAGGCTCACGCTTCTTATGCTTTCAACAGCTATTACCAGCGCTCTCATTTGGCTCCTGGTTCTTGTACTTTCTCCGGCACCGCCACTCTTGCCAAGACTGATCCCAGCTATGGATCTTGCGTATACCCTGCGTCTCCAAGCACTGCGGGAGGCATGACACCGACGACCACAGGCGGTGGCGCCTATGGAAATACAACATCAATGACCCCAACAACCACCTCTCCAACAACCCTTGATGGCGGAGCAGGTCTTAATCCCAACACCATGGGCCCTCCTATCTCAACCACGACCGACTCAAAGGCTTCTGATCTCCATACCACACCTGCTAACACAGGTCTTTTGGGAATTTCACTGCTTATAATCATTTCACTTGCCTTGTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_119680.p1 GENE.S_Transcript_119680~~S_Transcript_119680.p1 ORF type:complete len:220 (+),score=27.45,X8|PF07983.9|2.3e-20,X8|PF07983.9|1.6e+04 S_Transcript_119680:247-906(+)
MDEEGPTAATSSTANTNRTSSINHQRRLMMVVVLAVLISASYQVKMVKALWCVARSDASEEALQRGLDYACAAGADCAPILDKGLCFLPNTLQAHASYAFNSYYQRSHLAPGSCTFSGTATLAKTDPSYGSCVYPASPSTAGGMTPTTTGGGAYGNTTSMTPTTTSPTTLDGGAGLNPNTMGPPISTTTDSKASDLHTTPANTGLLGISLLIIISLALF*

Click here to download the sequence:
Link to NCBI Protein BLAST