Transcript Information: S_Transcript_119735.p1


Annotated TAIR IDAT3G48440.1
Annotated Gene NameZinc finger C-x8-C-x5-C-x3-H type family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17941402-17943576 | Forward length=448
E-Value9.5E-119
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.673907119481
Replicate 221.051176935882
Replicate 319.691043547774
Condition 2: 8 Hour
Replicate 124.445043485797
Replicate 225.302658505193
Replicate 325.737257042696
Condition 3: 24 Hour
Replicate 117.599917048099
Replicate 219.546300376981
Replicate 321.091796958864


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_119735.p1 GENE.S_Transcript_119735~~S_Transcript_119735.p1 ORF type:5prime_partial len:458 (+),score=107.15,zf-CCCH|PF00642.20|5.5e-07,zf-CCCH|PF00642.20|0.00013,zf-CCCH|PF00642.20|2.1e-10,zf-CCCH|PF00642.20|7.7e-07,zf-CCCH|PF00642.20|5.9e-09,Torus|PF16131.1|0.0061,Torus|PF16131.1|59,Torus|PF16131.1|0.55,Torus|PF16131.1|21,Torus|PF16131.1|0.048 S_Transcript_119735:2-1375(+)
TCAGCATCAATTCCCTCTCCACAGCCTGAAGATTCAATCAACGATCAACTCGAAAACCTCTCACTTGATGAAGAACCTCAAAACAACACCACCACCGACAACAACAACAACAACAATGGAGGAGAAGAAGACGTAGTAATTAGGGAAAACTTAGAGGAGAGAGAAAATGATGAAGTAGAAAATGGGGAAGAAGAGAAGGAAGTTCAGAGTGAGGAGGTTCAGGATGAAGAAGTTGTGAATAATGTGGTGATTGAAAAAAGTGGAAATGGTAATGAGAATAAAAATGGAGATAGAGAAAAGTTGGAGAGAGAAAAGAGTAAGATAAGTAGTAGTAGTAAGTATCCAGTGAGACCTGAAGCTGAGGATTGTTCTTTTTATGTGCGTACTGGCATGTGTAAATTTGGTATGAATTGCAAGTTTAATCACCCCCCTAATAGGAAAACTCTGGGTGGGAAGGTGAAGGGAAAGGACGAATCTGGTAATGGTTCTCCCCCTCAGAAGGTGAAGGACAAGGAGGATAGTTCGGATAAAGAAGGCCAGATTGATTGCAAGTACTTTGACCTCCCTGCAGGCTGTAAGTTTGGGAAAGCCTGTAAATTCAACCATAGCAGAAAAAGCACCCCAATGATAGAGCTTAACTTCATGGGTTTGCCGATTCGTCCGGGAGAAAAAGAGTGCCCTTATTACATGCGTAATGGCTCATGCAAGTATGGGGCAAACTGTAGGTTTAACCATCCTGATCCGACAACTTTAGGAGGATCTGATGCCCAGCCTGCCTACAGTAATGGAGGATCTGTCATATCATCTACTACCTCGCAATCAACTTTGGCTCCATGGTCTCCACCAGAAAATCCTCCATATGTGCCATTGATGTTTCCACCAACTCAAGGTGTGCCGTCTCGGCCAGAGTGGAATGCTTATCGGGCTCCTGTATATCCAACAGAGAGGAATATGCACATGCCAGCAGCATATGCAATTAATAGCCAGTCATTGGAAAGAAATGCTTATACCCATCAACAGGAGCAGATATTGGTTGATGAGTTTCCAGAAAGACCTGGTCAACCTGAGTGCAGCTACTTTCTGAAAACTGGCAACTGTAAATACAGATCTGCTTGTAAATTTCATCATCCCAAAAGTGCAAATGCAAAGCCACCACCATGTTCTCTCAGTGATTTGGGCTTGCCTCTGAGACCTGGTGAAAATGTTTGTAGCTATTACAGCCGGTATGGAATTTGCAAGTATGGACCGGCATGTAAATATGACCATCCAGTAAATTATGCCCATTCAGAATCTCTGGCCATTCCAGCAGTAGATCACACACCCGCATTATGTGATTCTGTGGTTAGCACTGATGCTGTGGCTGCGAGTAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_119735.p1 GENE.S_Transcript_119735~~S_Transcript_119735.p1 ORF type:5prime_partial len:458 (+),score=107.15,zf-CCCH|PF00642.20|5.5e-07,zf-CCCH|PF00642.20|0.00013,zf-CCCH|PF00642.20|2.1e-10,zf-CCCH|PF00642.20|7.7e-07,zf-CCCH|PF00642.20|5.9e-09,Torus|PF16131.1|0.0061,Torus|PF16131.1|59,Torus|PF16131.1|0.55,Torus|PF16131.1|21,Torus|PF16131.1|0.048 S_Transcript_119735:2-1375(+)
SASIPSPQPEDSINDQLENLSLDEEPQNNTTTDNNNNNNGGEEDVVIRENLEERENDEVENGEEEKEVQSEEVQDEEVVNNVVIEKSGNGNENKNGDREKLEREKSKISSSSKYPVRPEAEDCSFYVRTGMCKFGMNCKFNHPPNRKTLGGKVKGKDESGNGSPPQKVKDKEDSSDKEGQIDCKYFDLPAGCKFGKACKFNHSRKSTPMIELNFMGLPIRPGEKECPYYMRNGSCKYGANCRFNHPDPTTLGGSDAQPAYSNGGSVISSTTSQSTLAPWSPPENPPYVPLMFPPTQGVPSRPEWNAYRAPVYPTERNMHMPAAYAINSQSLERNAYTHQQEQILVDEFPERPGQPECSYFLKTGNCKYRSACKFHHPKSANAKPPPCSLSDLGLPLRPGENVCSYYSRYGICKYGPACKYDHPVNYAHSESLAIPAVDHTPALCDSVVSTDAVAASS*

Click here to download the sequence:
Link to NCBI Protein BLAST