Transcript Information: S_Transcript_119736.p2


Annotated TAIR IDAT3G48440.1
Annotated Gene NameZinc finger C-x8-C-x5-C-x3-H type family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17941402-17943576 | Forward length=448
E-Value1.7E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5005504516277
Replicate 22.9614482627537
Replicate 33.2181955582122
Condition 2: 8 Hour
Replicate 11.1449873995776
Replicate 23.153079338485
Replicate 33.4334251175809
Condition 3: 24 Hour
Replicate 14.9847385146322
Replicate 24.4110774208998
Replicate 35.5860903716029


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_119736.p2 GENE.S_Transcript_119736~~S_Transcript_119736.p2 ORF type:5prime_partial len:149 (+),score=41.91,zf-CCCH|PF00642.20|1e+04,zf-CCCH|PF00642.20|1.7e-07 S_Transcript_119736:1-447(+)
AACAACAACAACAACAACAACAACAACAACAACAACAAAAGCAACAGCAATGGAGGAGAAGAAGGAGACGTAGTAATTAGGGAAAACTTAGAGGAGAGAGAAAATGATGAAGAAGAAAATGGGGAAGAAGACAAGGAAGTTCAGGATGAGGAGGTTCAGGATGAAGAAGTTGTGAATAATGTGGTGATTGAAAAAAGTGGAAATGGTAATGAGAATAAAAATGGAGATAGAGGAAATTTGGAGAGAGAAAAGAGTAAGAGAAGTAGTTGTAGTAAGTATCCAGTGAGACTTGAAGCTGAGGATTGTTCTTTTTATGTGCGTACTGGCATGTGTAAATTTGGTATGAATTGCAAGTTTAATCACCCCCCTAATAGGAAAACTTTGGTAAAGTTTTTTCTTTCTTTCTTATTTTTTAGCTTAAATTTAAAGCCTTTTCTTTTAGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_119736.p2 GENE.S_Transcript_119736~~S_Transcript_119736.p2 ORF type:5prime_partial len:149 (+),score=41.91,zf-CCCH|PF00642.20|1e+04,zf-CCCH|PF00642.20|1.7e-07 S_Transcript_119736:1-447(+)
NNNNNNNNNNNNKSNSNGGEEGDVVIRENLEERENDEEENGEEDKEVQDEEVQDEEVVNNVVIEKSGNGNENKNGDRGNLEREKSKRSSCSKYPVRLEAEDCSFYVRTGMCKFGMNCKFNHPPNRKTLVKFFLSFLFFSLNLKPFLLV*

Click here to download the sequence:
Link to NCBI Protein BLAST