Transcript Information: S_Transcript_119737.p1


Annotated TAIR IDAT3G48440.1
Annotated Gene NameZinc finger C-x8-C-x5-C-x3-H type family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17941402-17943576 | Forward length=448
E-Value1.3E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.7676827279379
Replicate 20.31821331092569
Replicate 30.26600100120578
Condition 2: 8 Hour
Replicate 10.51262957493108
Replicate 20.10755696461407
Replicate 30.20496007312482
Condition 3: 24 Hour
Replicate 10.73516434824115
Replicate 20.43584253031437
Replicate 30.18188974330613


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_119737.p1 GENE.S_Transcript_119737~~S_Transcript_119737.p1 ORF type:5prime_partial len:416 (+),score=99.80,zf-CCCH|PF00642.20|6.9e-07,zf-CCCH|PF00642.20|0.00012,zf-CCCH|PF00642.20|1.9e-10,zf-CCCH|PF00642.20|6.8e-07 S_Transcript_119737:1-1248(+)
AACAACAACAACAACAACAACAACAACAACAACAACAAAAGCAACAGCAATGGAGGAGAAGAAGGAGACGTAGTAATTAGGGAAAACTTAGAGGAGAGAGAAAATGATGAAGAAGAAAATGGGGAAGAAGACAAGGAAGTTCAGGATGAGGAGGTTCAGGATGAAGAAGTTGTGAATAATGTGGTGATTGAAAAAAGTGGAAATGGTAATGAGAATAAAAATGGAGATAGAGGAAATTTGGAGAGAGAAAAGAGTAAGAGAAGTAGTTGTAGTAAGTATCCAGTGAGACTTGAAGCTGAGGATTGTTCTTTTTATGTGCGTACTGGCATGTGTAAATTTGGTATGAATTGCAAGTTTAATCACCCCCCTAATAGGAAAACTCTGGGTGGGAAGGTGAAGGGAAAGGAAGCATCTGGTGATGGGGCTCCCACTCAGAAGGTGAAGGATAAGGAGGATAGTTCGGATAAAGAAGGCCAGATTGATTGCAAGTACTTTGACCTCCCTGCAGGCTGTAAGTTTGGGAAAGCCTGTAAATTCAACCATAGCAGAAAAAGCACCCCAATGATAGAGCTTAACTTCATGGGTTTGCCGATTCGTCCGGGAGAAAAAGAGTGCCCTTATTACATGCGTAATGGCTCATGCAAGTATGGGGCAAACTGTAGGTTTAACCATCCTGATCCGACAACTTTAGGAGGATCTGATGCCCAGCCTGCCTACAGTAATGGAGGATCTGTCATATCATCTACTACCTCGCAATCAACTTTGGCTCCATGGTCTCCACCAGAAAATCCTCCATATGTGCCATTGATGTTTCCACCAACTCAAGGTGTGCCGTCTCGGCCAGAGTGGAATGCTTATCGGGCTCCTGTATATCCAACAGAGAGGAATATGCACATGCCAGCAGCATATGCAATTAATAGCCAGTCATTGGAAAGAAATGCTTATACCCATCAACAGGAGCAGATATTGGTTGATGAGTTTCCAGAAAGACCTGGTCAACCTGAGTGCAGCTACTTTCTGAAAACTGGCAACTGTAAATACAGATCTGCTTGTAAATTTCATCATCCCAAAAGTGCAAATGCAAAGCCACCACCATGTTCTCTCAGTGATTCGGGCTTGCCTCTGAGACTTGTGAGTAAAGAGCACCCCATTTCTACAGGAACATGCTCGTGCACTCCCAGCATTAGCAGGTCTGATTTTTCATGGCCTTTTGTAGAACTTGCGCAGGCCTTAAAAGGATCTTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_119737.p1 GENE.S_Transcript_119737~~S_Transcript_119737.p1 ORF type:5prime_partial len:416 (+),score=99.80,zf-CCCH|PF00642.20|6.9e-07,zf-CCCH|PF00642.20|0.00012,zf-CCCH|PF00642.20|1.9e-10,zf-CCCH|PF00642.20|6.8e-07 S_Transcript_119737:1-1248(+)
NNNNNNNNNNNNKSNSNGGEEGDVVIRENLEERENDEEENGEEDKEVQDEEVQDEEVVNNVVIEKSGNGNENKNGDRGNLEREKSKRSSCSKYPVRLEAEDCSFYVRTGMCKFGMNCKFNHPPNRKTLGGKVKGKEASGDGAPTQKVKDKEDSSDKEGQIDCKYFDLPAGCKFGKACKFNHSRKSTPMIELNFMGLPIRPGEKECPYYMRNGSCKYGANCRFNHPDPTTLGGSDAQPAYSNGGSVISSTTSQSTLAPWSPPENPPYVPLMFPPTQGVPSRPEWNAYRAPVYPTERNMHMPAAYAINSQSLERNAYTHQQEQILVDEFPERPGQPECSYFLKTGNCKYRSACKFHHPKSANAKPPPCSLSDSGLPLRLVSKEHPISTGTCSCTPSISRSDFSWPFVELAQALKGSF*

Click here to download the sequence:
Link to NCBI Protein BLAST