Transcript Information: S_Transcript_119740.p1


Annotated TAIR IDAT3G48440.1
Annotated Gene NameZinc finger C-x8-C-x5-C-x3-H type family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17941402-17943576 | Forward length=448
E-Value1.4E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.9328446225392
Replicate 24.8972324647115
Replicate 34.0514935103562
Condition 2: 8 Hour
Replicate 15.5143457799451
Replicate 24.8634453564623
Replicate 33.5119931980747
Condition 3: 24 Hour
Replicate 15.2987589244919
Replicate 24.252706062381
Replicate 35.5984858290532


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_119740.p1 GENE.S_Transcript_119740~~S_Transcript_119740.p1 ORF type:5prime_partial len:437 (+),score=100.87,zf-CCCH|PF00642.20|5.2e-07,zf-CCCH|PF00642.20|0.00012,zf-CCCH|PF00642.20|2e-10,zf-CCCH|PF00642.20|7.3e-07,Torus|PF16131.1|0.0056,Torus|PF16131.1|56,Torus|PF16131.1|0.52,Torus|PF16131.1|20 S_Transcript_119740:2-1312(+)
TCAGCATCAATTCCCTCTCCACAGCCTGAAGATTCAATCAACGATCAACTCGAAAACCTCTCACTTGATGAAGAACCTCAAAACAACACCACCACCGACAACAACAACAACAACAATGGAGGAGAAGAAGACGTAGTAATTAGGGAAAACTTAGAGGAGAGAGAAAATGATGAAGTAGAAAATGGGGAAGAAGAGAAGGAAGTTCAGAGTGAGGAGGTTCAGGATGAAGAAGTTGTGAATAATGTGGTGATTGAAAAAAGTGGAAATGGTAATGAGAATAAAAATGGAGATAGAGAAAAGTTGGAGAGAGAAAAGAGTAAGATAAGTAGTAGTAGTAAGTATCCAGTGAGACCTGAAGCTGAGGATTGTTCTTTTTATGTGCGTACTGGCATGTGTAAATTTGGTATGAATTGCAAGTTTAATCACCCCCCTAATAGGAAAACTCTGGGTGGGAAGGTGAAGGGAAAGGACGAATCTGGTAATGGTTCTCCCCCTCAGAAGGTGAAGGACAAGGAGGATAGTTCGGATAAAGAAGGCCAGATTGATTGCAAGTACTTTGACCTCCCTGCAGGCTGTAAGTTTGGGAAAGCCTGTAAATTCAACCATAGCAGAAAAAGCACCCCAATGATAGAGCTTAACTTCATGGGTTTGCCGATTCGTCCGGGAGAAAAAGAGTGCCCTTATTACATGCGTAATGGCTCATGCAAGTATGGGGCAAACTGTAGGTTTAACCATCCTGATCCGACAACTTTAGGAGGATCTGATGCCCAGCCTGCCTACAGTAATGGAGGATCTGTCATATCATCTACTACCTCGCAATCAACTTTGGCTCCATGGTCTCCACCAGAAAATCCTCCATATGTGCCATTGATGTTTCCACCAACTCAAGGTGTGCCGTCTCGGCCAGAGTGGAATGCTTATCGGGCTCCTGTATATCCAACAGAGAGGAATATGCACATGCCAGCAGCATATGCAATTAATAGCCAGTCATTGGAAAGAAATGCTTATACCCATCAACAGGAGCAGATATTGGTTGATGAGTTTCCAGAAAGACCTGGTCAACCTGAGTGCAGCTACTTTCTGAAAACTGGCAACTGTAAATACAGATCTGCTTGTAAATTTCATCATCCCAAAAGTGCAAATGCAAAGCCACCACCATGTTCTCTCAGTGATTCGGGCTTGCCTCTGAGACTTGTGAGTAAAGAGCACCCCATTTCTACAGGAACATGCTCGTGCACTCCCAGCATTAGCAGGTCTGATTTTTCATGGCCTTTTGTAGAACTTGCGCAGGCCTTAAAAGGATCTTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_119740.p1 GENE.S_Transcript_119740~~S_Transcript_119740.p1 ORF type:5prime_partial len:437 (+),score=100.87,zf-CCCH|PF00642.20|5.2e-07,zf-CCCH|PF00642.20|0.00012,zf-CCCH|PF00642.20|2e-10,zf-CCCH|PF00642.20|7.3e-07,Torus|PF16131.1|0.0056,Torus|PF16131.1|56,Torus|PF16131.1|0.52,Torus|PF16131.1|20 S_Transcript_119740:2-1312(+)
SASIPSPQPEDSINDQLENLSLDEEPQNNTTTDNNNNNNGGEEDVVIRENLEERENDEVENGEEEKEVQSEEVQDEEVVNNVVIEKSGNGNENKNGDREKLEREKSKISSSSKYPVRPEAEDCSFYVRTGMCKFGMNCKFNHPPNRKTLGGKVKGKDESGNGSPPQKVKDKEDSSDKEGQIDCKYFDLPAGCKFGKACKFNHSRKSTPMIELNFMGLPIRPGEKECPYYMRNGSCKYGANCRFNHPDPTTLGGSDAQPAYSNGGSVISSTTSQSTLAPWSPPENPPYVPLMFPPTQGVPSRPEWNAYRAPVYPTERNMHMPAAYAINSQSLERNAYTHQQEQILVDEFPERPGQPECSYFLKTGNCKYRSACKFHHPKSANAKPPPCSLSDSGLPLRLVSKEHPISTGTCSCTPSISRSDFSWPFVELAQALKGSF*

Click here to download the sequence:
Link to NCBI Protein BLAST