Transcript Information: S_Transcript_119745.p1


Annotated TAIR IDAT1G48195.1
Annotated Gene NameZinc finger C-x8-C-x5-C-x3-H type family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:17796349-17796597 | Forward length=82
E-Value2.6E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.3944282144026
Replicate 23.1301898228053
Replicate 32.9542140179681
Condition 2: 8 Hour
Replicate 14.8799520176506
Replicate 21.5358248494091
Replicate 33.9509923478341
Condition 3: 24 Hour
Replicate 14.2490047979417
Replicate 24.0452569861673
Replicate 31.7892068113469


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_119745.p1 GENE.S_Transcript_119745~~S_Transcript_119745.p1 ORF type:5prime_partial len:437 (+),score=106.09,zf-CCCH|PF00642.20|7.3e-07,zf-CCCH|PF00642.20|0.00012,zf-CCCH|PF00642.20|2e-10,zf-CCCH|PF00642.20|7.3e-07,zf-CCCH|PF00642.20|5.5e-09,Torus|PF16131.1|0.062,Torus|PF16131.1|56,Torus|PF16131.1|0.52,Torus|PF16131.1|20,Torus|PF16131.1|0.045 S_Transcript_119745:1-1311(+)
AACAACAACAACAACAACAACAACAACAACAACAACAAAAGCAACAGCAATGGAGGAGAAGAAGGAGACGTAGTAATTAGGGAAAACTTAGAGGAGAGAGAAAATGATGAAGAAGAAAATGGGGAAGAAGACAAGGAAGTTCAGGATGAGGAGGTTCAGGATGAAGAAGTTGTGAATAATGTGGTGATTGAAAAAAGTGGAAATGGTAATGAGAATAAAAATGGAGATAGAGGAAATTTGGAGAGAGAAAAGAGTAAGAGAAGTAGTTGTAGTAAGTATCCAGTGAGACTTGAAGCTGAGGATTGTTCTTTTTATGTGCGTACTGGCATGTGTAAATTTGGTATGAATTGCAAGTTTAATCACCCCCCTAATAGGAAAACTCTGGGTGGGAAGGTGAAGGGAAAGGAAGCATCTGGTGATGGGGCTCCCACTCAGAAGGTGAAGGATAAGGAGGATAGTTCGGATAAAGAAGGCCAGATTGATTGCAAGTACTTTGACCTCCCTGCAGGCTGTAAGTTTGGGAAAGCCTGTAAATTCAACCATAGCAGAAAAAGCACCCCAATGATAGAGCTTAACTTCATGGGTTTGCCGATTCGTCCGGGAGAAAAAGAGTGCCCTTATTACATGCGTAATGGCTCATGCAAGTATGGGGCAAACTGTAGGTTTAACCATCCTGATCCGACAACTTTAGGAGGATCTGATGCCCAGCCTGCCTACAGTAATGGAGGATCTGTCATATCATCTACTACCTCGCAATCAACTTTGGCTCCATGGTCTCCACCAGAAAATCCTCCATATGTGCCATTGATGTTTCCACCAACTCAAGGTGTGCCGTCTCGGCCAGAGTGGAATGCTTATCGGGCTCCTGTATATCCAACAGAGAGGAATATGCACATGCCAGCAGCATATGCAATTAATAGCCAGTCATTGGAAAGAAATGCTTATACCCATCAACAGGAGCAGATATTGGTTGATGAGTTTCCAGAAAGACCTGGTCAACCTGAGTGCAGCTACTTTCTGAAAACTGGCAACTGTAAATACAGATCTGCTTGTAAATTTCATCATCCCAAAAGTGCAAATGCAAAGCCACCACCATGTTCTCTCAGTGATTTGGGCTTGCCTCTGAGACCTGGTGAAAATGTTTGTAGCTATTACAGCCGGTATGGAATTTGCAAGTATGGACCGGCATGTAAATATGACCATCCAGTAAATTATGCCCATTCAGAATCTCTGGCCATTCCAGCAGTAGATCACACACCCGCATTATGTGATTCTGTGGTTAGCACTGATGCTGTGGCTGCGAGTAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_119745.p1 GENE.S_Transcript_119745~~S_Transcript_119745.p1 ORF type:5prime_partial len:437 (+),score=106.09,zf-CCCH|PF00642.20|7.3e-07,zf-CCCH|PF00642.20|0.00012,zf-CCCH|PF00642.20|2e-10,zf-CCCH|PF00642.20|7.3e-07,zf-CCCH|PF00642.20|5.5e-09,Torus|PF16131.1|0.062,Torus|PF16131.1|56,Torus|PF16131.1|0.52,Torus|PF16131.1|20,Torus|PF16131.1|0.045 S_Transcript_119745:1-1311(+)
NNNNNNNNNNNNKSNSNGGEEGDVVIRENLEERENDEEENGEEDKEVQDEEVQDEEVVNNVVIEKSGNGNENKNGDRGNLEREKSKRSSCSKYPVRLEAEDCSFYVRTGMCKFGMNCKFNHPPNRKTLGGKVKGKEASGDGAPTQKVKDKEDSSDKEGQIDCKYFDLPAGCKFGKACKFNHSRKSTPMIELNFMGLPIRPGEKECPYYMRNGSCKYGANCRFNHPDPTTLGGSDAQPAYSNGGSVISSTTSQSTLAPWSPPENPPYVPLMFPPTQGVPSRPEWNAYRAPVYPTERNMHMPAAYAINSQSLERNAYTHQQEQILVDEFPERPGQPECSYFLKTGNCKYRSACKFHHPKSANAKPPPCSLSDLGLPLRPGENVCSYYSRYGICKYGPACKYDHPVNYAHSESLAIPAVDHTPALCDSVVSTDAVAASS*

Click here to download the sequence:
Link to NCBI Protein BLAST