Transcript Information: S_Transcript_119840.p1


Annotated TAIR IDAT3G19770.1
Annotated Gene NameVacuolar sorting protein 9 (VPS9) domain
Annotated Gene Symbol(s)ATVPS9A, VPS9A, VPS9
Annotation TypeHomolog
Chromosome Positionchr3:6866916-6869114 | Forward length=520
E-Value1E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3601744214686
Replicate 21.9566388292597
Replicate 33.1019892495353
Condition 2: 8 Hour
Replicate 15.4780819163277
Replicate 24.5154189915044
Replicate 33.9763507764644
Condition 3: 24 Hour
Replicate 12.4717452267645
Replicate 22.2178653530371
Replicate 32.0054224909267


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_119840.p1 GENE.S_Transcript_119840~~S_Transcript_119840.p1 ORF type:5prime_partial len:327 (-),score=93.03,VPS9|PF02204.14|2.7e-19 S_Transcript_119840:448-1428(-)
AATGCTGCTGTTGCTGCTAATGAAGACCCTCCTGGAGCTGATGAATTTCTTCCAGTTCTTATTTATGTGACAATAAAGGCCAACCCTCCCCAGCTGCACTCAAACTTGTTGTATATACAGCAATATCGACGTCAATCTCGAATGGTTTCTGAGACAGCCTACTACTTCACAAATATTCTTTCTGCTGAATCCTTCATCTCAAATATTGATGCTCAGTCCCTTTCGATGGACGAAGTGGAATTTGAAAGGAATATGGAATCTGCTCGGGCACTTCTATCTGGCCTAACATCTGATTATGAGAATAATGTGACTGCTGAAAGTGCTTCCAGTTCAAAGCCATTGGAGTACAAGCAACAAGCTTTGACGCCTAATGAAAAGGATTCCACACGACAACCTCGAGTGTCCTCAGAGTCTTCTGCCATGAAATCCGGTGGCAAGGAGGATGCACAAGTGAAAGATCAATCATCAATGACAAAAGTTATGTCCATATCTGATTTAGAGGAAAAAGGCGCAACAATAATATTGAAGGAGGATGGCATCAACAATGTTTTCAAAGAGTTCCCTTATGTATTTTCCAGTTTTGGGGATCTAACCTTACATGACGTTGAAGACTTGCTCAATAACTATAGACAGCTTGTTTTCAAGTATGTTTGCCTTGCCAAAGGGCTTGGCGTCACACCATCTCCCCCGTCTATTCCAAAAGCACAAGCCCAGGGCCAGGTGGAAACCAGGGAAAGATCTGAACCTGTTAGAGTAGGAGAAAGAAATGAAAATAATGCTGACAACCATGATCAATCCTTAGCAAATTTGCATTCTGAAATGGGAATTTCTGAATCAAATTTGCCCCGAGAGAATGCTGACACGAATCTGAAGGAGGAAGAAAGCTGTGAAGTGGCCCCACCTTCTGGAGATTCCGAAGCTGTGGTGCCTCAGGAGGGGGCTACTGGTCTTCCTAGTGGTGAGCACGATGCTGAAACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_119840.p1 GENE.S_Transcript_119840~~S_Transcript_119840.p1 ORF type:5prime_partial len:327 (-),score=93.03,VPS9|PF02204.14|2.7e-19 S_Transcript_119840:448-1428(-)
NAAVAANEDPPGADEFLPVLIYVTIKANPPQLHSNLLYIQQYRRQSRMVSETAYYFTNILSAESFISNIDAQSLSMDEVEFERNMESARALLSGLTSDYENNVTAESASSSKPLEYKQQALTPNEKDSTRQPRVSSESSAMKSGGKEDAQVKDQSSMTKVMSISDLEEKGATIILKEDGINNVFKEFPYVFSSFGDLTLHDVEDLLNNYRQLVFKYVCLAKGLGVTPSPPSIPKAQAQGQVETRERSEPVRVGERNENNADNHDQSLANLHSEMGISESNLPRENADTNLKEEESCEVAPPSGDSEAVVPQEGATGLPSGEHDAET*

Click here to download the sequence:
Link to NCBI Protein BLAST