Transcript Information: S_Transcript_119843.p1


Annotated TAIR IDAT3G19770.1
Annotated Gene NameVacuolar sorting protein 9 (VPS9) domain
Annotated Gene Symbol(s)ATVPS9A, VPS9A, VPS9
Annotation TypeOrtholog
Chromosome Positionchr3:6866916-6869114 | Forward length=520
E-Value8.2E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.418643572763
Replicate 215.93423690265
Replicate 312.00241554647
Condition 2: 8 Hour
Replicate 18.9702038635559
Replicate 29.0552720684608
Replicate 311.334617377252
Condition 3: 24 Hour
Replicate 115.256744025177
Replicate 211.152034267726
Replicate 315.013121669712


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_119843.p1 GENE.S_Transcript_119843~~S_Transcript_119843.p1 ORF type:3prime_partial len:126 (-),score=33.75,VPS9|PF02204.14|9.9e+03,VPS9|PF02204.14|2e-08 S_Transcript_119843:2-376(-)
ATGGAAGCTGCATTCAGCGCCCATTCGCTTTGGGCGGGTTGTTCCGAAGAGGAGCTTGACAGTGCTGGCGAGGGACTGGAGAAATATGTCATGACAAAGCTATTTAGCCGTGTTTTTGCTTCAGTTCCAGATGACGTGAAAGTAGATCAGGAGCTTTCAGAAAAGATGGCTTTAGTTCAGCAATTTATTCGGCCTGAAAATTTGGATATTAAGCCTACCTTCCAAAATGAGTCGTCATGGCTGCTTGCACAAAAGGAGCTGCAAAAGATGAATATGTACAAGGCTCCCAGAGAAAAGCTTGCTTGTATTCTTAACTGCTGCAAGGTCATAACTAATCTGCTACACAATGCTGCTGTTGCTGCTAATGAAAATCCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_119843.p1 GENE.S_Transcript_119843~~S_Transcript_119843.p1 ORF type:3prime_partial len:126 (-),score=33.75,VPS9|PF02204.14|9.9e+03,VPS9|PF02204.14|2e-08 S_Transcript_119843:2-376(-)
MEAAFSAHSLWAGCSEEELDSAGEGLEKYVMTKLFSRVFASVPDDVKVDQELSEKMALVQQFIRPENLDIKPTFQNESSWLLAQKELQKMNMYKAPREKLACILNCCKVITNLLHNAAVAANENP

Click here to download the sequence:
Link to NCBI Protein BLAST