Transcript Information: S_Transcript_11988.p1


Annotated TAIR IDAT3G50430.1
Annotated Gene Nameunknown protein; Has 54 Blast hits to 54 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 29; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:18713718-18716759 | Forward length=642
E-Value2E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5775303859739
Replicate 23.2052478776051
Replicate 32.0094990890122
Condition 2: 8 Hour
Replicate 12.5301310545751
Replicate 22.058426751355
Replicate 32.3225499811723
Condition 3: 24 Hour
Replicate 12.8033385593256
Replicate 23.2925634251352
Replicate 34.4581337568365


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11988.p1 GENE.S_Transcript_11988~~S_Transcript_11988.p1 ORF type:3prime_partial len:413 (+),score=47.99 S_Transcript_11988:78-1313(+)
ATGTCAGCTTCAACTTCTACTGGCGGATGCAATGGAGCCCTTTCGCGCCTCTGCTCCCTAGTCCACGAATTCCTCCCTCCATTCCCCGATTCACAGCCCGTTCCCCTAACCCTAGACCAGGACCGATCGCTTCTCATTTCTCTCTCTCAGGTTTTGAACAAAATTCGGCACTGGATTAACGAACTTGAGAGTCAAGCACAAGGCGGTGTTAGTGCAATCTGCAATTCACATTCTACGGAGCACGAGTGTTTGACTTGCACTGTATCCAATTTGATTTCCTTGCTGAATATGAAGAATAAATATGTTCACCATTTGGTGGCCAACATTTTTCTGGCCATCTCAGAGTTTCTTTTAGACTATGGAAGCGATTGGGACAATTTTATTCATTTATTATGCTTTTGGTTGGACTTTGCACTTTGTAATACTCTTGCTCATTCTGTGCCACCTTCAATACATGGAGTGGAGAATTCAAAGTCTGTTCTGTTTGACACGAGCCTTATAAAATCCAGACTAGATAAGTCAACTTGGAATACTGTTGCTGGAATCTTGGGAATATTGCGGGGCATAGTAAAGCTATTGAAGGGAGAAGATGATGAACATGTCGAAGTATTGTGGATTGGTTTGAGTAAATCTCTTTTGAAGCTTCCTTGGGACACGTTAAATGCGAGGCATGACAACAGTAATACGGAGGATGGAGCTTGTTCTGGAGAAAATGTGTCGCCTTTGATGAATGATGGGGAGACACTGCAGAAAATCCTGTTCTTGGGGAATCTTGTCCAGATACTCTGCTCTGTAGTCGGGATAAGTGGTTTTTCAGAAGCTTATAAATTTGCTATTTCTAATGGGTCCTGTGAGTTTGTTCCTAGACTTCTTCATTGGTGTCTTGCTAAAGAATGGAGTTCCAGATACAGGCATATCCTTCCATACTTCCAGCATAAAAATTTGACGCTGATGACAAGACTCAGCTTTTGTATGCAACTTGATTGTTCATTCCTCATTCAGTGTTTGGAATTTCTTCACAAATACTACCAAGATTTGCTCTGGAAACCTATGTCTCAGCTTGCCAGCCACCAGGATGACATTCTTGAAGGCTCTCCATTTTTGTTTACACTTTATGATCAGGATATAGATCACCTTTCTTCACACCACTTACAAAGGCTGGCTGTTTTTCTTTTCCTTAGATGTTCTTTCAGCTTGATTGGCTTGACAAAATTAACAGCAGACTTGAGATGCACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11988.p1 GENE.S_Transcript_11988~~S_Transcript_11988.p1 ORF type:3prime_partial len:413 (+),score=47.99 S_Transcript_11988:78-1313(+)
MSASTSTGGCNGALSRLCSLVHEFLPPFPDSQPVPLTLDQDRSLLISLSQVLNKIRHWINELESQAQGGVSAICNSHSTEHECLTCTVSNLISLLNMKNKYVHHLVANIFLAISEFLLDYGSDWDNFIHLLCFWLDFALCNTLAHSVPPSIHGVENSKSVLFDTSLIKSRLDKSTWNTVAGILGILRGIVKLLKGEDDEHVEVLWIGLSKSLLKLPWDTLNARHDNSNTEDGACSGENVSPLMNDGETLQKILFLGNLVQILCSVVGISGFSEAYKFAISNGSCEFVPRLLHWCLAKEWSSRYRHILPYFQHKNLTLMTRLSFCMQLDCSFLIQCLEFLHKYYQDLLWKPMSQLASHQDDILEGSPFLFTLYDQDIDHLSSHHLQRLAVFLFLRCSFSLIGLTKLTADLRCT

Click here to download the sequence:
Link to NCBI Protein BLAST