Transcript Information: S_Transcript_120033.p1


Annotated TAIR IDAT1G55140.1
Annotated Gene NameRibonuclease III family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:20572503-20574332 | Reverse length=237
E-Value8.1E-84
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.583590101816
Replicate 222.653757134948
Replicate 323.629755607113
Condition 2: 8 Hour
Replicate 130.369640674846
Replicate 233.058401338167
Replicate 330.736690966111
Condition 3: 24 Hour
Replicate 113.945617585513
Replicate 216.188436840248
Replicate 312.611022202558


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_120033.p1 GENE.S_Transcript_120033~~S_Transcript_120033.p1 ORF type:3prime_partial len:224 (+),score=37.95,Ribonuclease_3|PF00636.22|2.1e-10 S_Transcript_120033:163-831(+)
ATGGCGTTAGCAACAACTCCTACCAGCAGAGTATCTCCAGTAAGAGCTTCATGGGACACCCAACAGCGTTTACCTTACAACAGAAACGCCCCTCGCAAAATCAAAAAACCTGATTCACTTTCTTCATCATTATTGTCCACAACAACTTCAACTTCTCCAACCAAACAGAGCCCTCGTTTACAGATTAATGTTGATGAACTCCTCAAGTTCAATGCTACCAGTCCTCGTCAAGAAACAGTGGAATTGGAGGAGCAAACATATATGGGTTATGAAAGGTGGTTGCCGAGCCCGCCCAAGGTGGACAAGCCTCGGTCTTCGCACAATGCAGCGGCTTTAGCATACATGGGAGATTGTATATATGAGTTATATGCTCGAAGGCACTTTTTAGCACCCGCACTGAATATTGAAGAATACAATGACCGTGTGATGGCAGTAGTGCGTTGTGAGGCACAGGATGCACTACTTCAGAAACTTCTTAACGAGAACTTTTTGTCTGGAGAAGAAAGGGATGTTCTTCGGTGGGGAAAGAACATTACATCGGCTAAAACACGGACTACAAAACGTGCTGGAATTGCAGTTTATAATAGAGCCTCTTCTTTGGAAACACTGATTGGTTACCTTTACCTCACCGACCCACCTCGCTTGGAGGAGATGATGTCAAGGTTAGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_120033.p1 GENE.S_Transcript_120033~~S_Transcript_120033.p1 ORF type:3prime_partial len:224 (+),score=37.95,Ribonuclease_3|PF00636.22|2.1e-10 S_Transcript_120033:163-831(+)
MALATTPTSRVSPVRASWDTQQRLPYNRNAPRKIKKPDSLSSSLLSTTTSTSPTKQSPRLQINVDELLKFNATSPRQETVELEEQTYMGYERWLPSPPKVDKPRSSHNAAALAYMGDCIYELYARRHFLAPALNIEEYNDRVMAVVRCEAQDALLQKLLNENFLSGEERDVLRWGKNITSAKTRTTKRAGIAVYNRASSLETLIGYLYLTDPPRLEEMMSRLG

Click here to download the sequence:
Link to NCBI Protein BLAST