Transcript Information: S_Transcript_12020.p1


Annotated TAIR IDAT3G24520.1
Annotated Gene Nameheat shock transcription factor C1
Annotated Gene Symbol(s)AT-HSFC1, HSFC1
Annotation TypeOrtholog
Chromosome Positionchr3:8941455-8942531 | Forward length=330
E-Value9.5E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.78273533044649
Replicate 21.1355847566368
Replicate 30.40682506066766
Condition 2: 8 Hour
Replicate 12.9792824707759
Replicate 21.3159910964545
Replicate 32.3510126034906
Condition 3: 24 Hour
Replicate 12.0881138630715
Replicate 22.1663937536214
Replicate 33.1527555506395


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_12020.p1 GENE.S_Transcript_12020~~S_Transcript_12020.p1 ORF type:internal len:136 (+),score=-0.39,HSF_DNA-bind|PF00447.13|4.6e-27 S_Transcript_12020:2-406(+)
TATACTCCTATAAATATAAATTATTCCTCCTGTGATTACATTAGCTCCCTTCTTCTCCATCCACACAACGAGCGAGCTGAGATAGAACAGAATACCAACCTACCCCTGAGCAAAAATTATAAGGTAGGGATCGTATGCGAAAGGGAGCAGATGGAGCAAGGTGGGAACAGCACGAATATAATAGCGCCGTTTGTGATGAAAACTTATCAGATGGTGAACGACCCTTCTACTGATCATATCATCCGTTGGGGACCAGCTTATAACAGTTTTATTGTGGTCGACCCTTTAGACTTCTCTCAGCGTATCCTCCCCTCCTTTTTCAAGCACAACAATTTCTCTAGCTTCGTTCGCCAGCTCAACACCTATAGATTTCGGAAGGTGGACCCTGACAAATGGGAATTTGCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_12020.p1 GENE.S_Transcript_12020~~S_Transcript_12020.p1 ORF type:internal len:136 (+),score=-0.39,HSF_DNA-bind|PF00447.13|4.6e-27 S_Transcript_12020:2-406(+)
YTPININYSSCDYISSLLLHPHNERAEIEQNTNLPLSKNYKVGIVCEREQMEQGGNSTNIIAPFVMKTYQMVNDPSTDHIIRWGPAYNSFIVVDPLDFSQRILPSFFKHNNFSSFVRQLNTYRFRKVDPDKWEFA

Click here to download the sequence:
Link to NCBI Protein BLAST