Transcript Information: S_Transcript_12029.p1


Annotated TAIR IDAT3G22830.1
Annotated Gene Nameheat shock transcription factor A6B
Annotated Gene Symbol(s)AT-HSFA6B, HSFA6B
Annotation TypeOrtholog
Chromosome Positionchr3:8078981-8080895 | Forward length=406
E-Value2.9E-109
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6444555831617
Replicate 24.7779289487612
Replicate 34.3463772935874
Condition 2: 8 Hour
Replicate 14.210745858797
Replicate 23.491148354607
Replicate 36.5169470384656
Condition 3: 24 Hour
Replicate 14.1046118660671
Replicate 24.1863091446756
Replicate 35.1407988596415


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_12029.p1 GENE.S_Transcript_12029~~S_Transcript_12029.p1 ORF type:5prime_partial len:314 (+),score=75.45,HSF_DNA-bind|PF00447.13|4.4e-28 S_Transcript_12029:2-943(+)
TCTTGGTGTAGAAGTGGCCATAGCTTTGTTGTTTGGGATCCTCAAGCTTTTTCTACCCATTTACTTCCAAATCATTTCAAGCATAATAATTTCTCTAGCTTTGTCAGGCAGCTCAATACTTATGGATTCAGAAAAATTGATCCAGATAGATGGGAATTTGCTAATGAAGGGTTTTTGAGAGGTCAAAGGCAATTATTGAAACACATAAGAAGAAGGAAAAACCCATCTCATCCTCTATCAATCCAACAAGGCATTGATCCATGTGTGGAAGTTGGGAGATTTGGGCTTGATGGTGAAGTTGATCGATTAAGGCGTGATAAGCAAGTGTTAATGATGGAATTAGTGAAATTAAGGCAACAACAACAAAACACTAGAGCTTATTTACAAGCAATGGAGCACAGATTACAGGCCACAGAAATGAAGCAACAACAAATGATGAACTTCTTAGCAAGGGCTATGCAAAATCCTGATTTCCTACAACAGTTGGTCCAACAGAAGGAGAAAAGGAAAGAGCTTGAGGAGGCCTTAAGCAAGAAAAGGAGGAGGCCCATTGAGCAAGGCCCAAAGGGTCATTTAGAAAGTGGGCAGTCTAGTAATCATCCTAGTAGAATTGGGCCAGGGCCCATTAAGGTTGAGCCATTGGAATTTGGGGGCCCATATGGGTATGATCATGGAGGGGTTTCTGAATTAGAAGCACTTGCTCTTGAAATGCAAGGTTATGGCAGGGTAACACTGGGAAACGAGCAATTAGAGCAAGATGATCATCAACTAGGGTTTGAACAACTTGAAGGGGAAGAAGACAAAGAACTCGACGAAGAATTTTGGGAAGAGCTATTGAGTGAAAGGTATAAGAACTCGAGGCAAGACCAACAACCCCATGACCGCGAGGATGTGAATGTATTGGCTGATAGATTGGGTTACTTAGGATCAAGCCCTAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_12029.p1 GENE.S_Transcript_12029~~S_Transcript_12029.p1 ORF type:5prime_partial len:314 (+),score=75.45,HSF_DNA-bind|PF00447.13|4.4e-28 S_Transcript_12029:2-943(+)
SWCRSGHSFVVWDPQAFSTHLLPNHFKHNNFSSFVRQLNTYGFRKIDPDRWEFANEGFLRGQRQLLKHIRRRKNPSHPLSIQQGIDPCVEVGRFGLDGEVDRLRRDKQVLMMELVKLRQQQQNTRAYLQAMEHRLQATEMKQQQMMNFLARAMQNPDFLQQLVQQKEKRKELEEALSKKRRRPIEQGPKGHLESGQSSNHPSRIGPGPIKVEPLEFGGPYGYDHGGVSELEALALEMQGYGRVTLGNEQLEQDDHQLGFEQLEGEEDKELDEEFWEELLSERYKNSRQDQQPHDREDVNVLADRLGYLGSSPK*

Click here to download the sequence:
Link to NCBI Protein BLAST