Transcript Information: S_Transcript_120459.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value1E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.11963555422314
Replicate 30.11398848986621
Condition 3: 24 Hour
Replicate 10
Replicate 20.12119685334945
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_120459.p1 GENE.S_Transcript_120459~~S_Transcript_120459.p1 ORF type:5prime_partial len:187 (-),score=34.16,RVT_1|PF00078.23|1.3e-27 S_Transcript_120459:333-893(-)
GTGGATGATGCTCGGAGGATGGGGTTTCAGGGGGTAGTTTTCAAGCTTGATTTTGAGAAGGCCTATGACAGAGTCAGTTGGACCTTCCTTGATCAGGTGCTCCAACGGAAGGGGTTTGGGGAGAAATGGAGGCAGTGGGTCAGGGGTTGTTTCTCTAATGCTACGTTTTCTGTGTTAGTAAATGGGGCGCCGAGGGAATGGTTCTCTTCCTCTCGAGGATTGAGACAAGGTGATCCCTTGTCCCCTTTTCTGTTTACTCTGGTGGCGGACATCTTTAGTAGGTTGTTGGATAGGGCGGTGGATAGAGGCTTGGTGGAGGGCTTTGTTCTGGGAAGGGAGGATCTGCGGGTCTCACATTTGTTGTTTGCAGACGATGCTAGTTTGTTTCTAGGGAAAGATATGACAAGGTTCAAGCATGTGTTCTCTATTTTGCAAGTCTTTAAGTCTATTTCGGGTATGCGTGTGAATCTTGGGAAATGCAGTCTGGCCCGGGTGAATGTGGCCTCAGAGGTTTTGGAGACTTATGCTTCTCTGGCTGCCAAATCAATAGTTGGCCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_120459.p1 GENE.S_Transcript_120459~~S_Transcript_120459.p1 ORF type:5prime_partial len:187 (-),score=34.16,RVT_1|PF00078.23|1.3e-27 S_Transcript_120459:333-893(-)
VDDARRMGFQGVVFKLDFEKAYDRVSWTFLDQVLQRKGFGEKWRQWVRGCFSNATFSVLVNGAPREWFSSSRGLRQGDPLSPFLFTLVADIFSRLLDRAVDRGLVEGFVLGREDLRVSHLLFADDASLFLGKDMTRFKHVFSILQVFKSISGMRVNLGKCSLARVNVASEVLETYASLAAKSIVGH*

Click here to download the sequence:
Link to NCBI Protein BLAST