Transcript Information: S_Transcript_12051.p1


Annotated TAIR IDAT1G55325.2
Annotated Gene NameRNA polymerase II transcription mediators
Annotated Gene Symbol(s)GCT
Annotation TypeOrtholog
Chromosome Positionchr1:20637594-20647714 | Forward length=2001
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.097648352752
Replicate 211.08212679358
Replicate 311.271084494628
Condition 2: 8 Hour
Replicate 111.136713798728
Replicate 212.049018122776
Replicate 310.391067253527
Condition 3: 24 Hour
Replicate 112.546575903642
Replicate 210.191187627586
Replicate 39.7305281174566


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_12051.p1 GENE.S_Transcript_12051~~S_Transcript_12051.p1 ORF type:complete len:1957 (+),score=437.64,Med13_C|PF06333.8|1.8e+02,Med13_C|PF06333.8|0.0067,Med13_C|PF06333.8|7.1e-12 S_Transcript_12051:105-5975(+)
ATGTGGACAAACATTTTCAGAATTGGAGGCCTCAATCAGCTGTCTTGGTTCCAGTTTCTCCCAAATGATTCTGATTTATCGTCATTGCCAGATAAAAGTGTTAAAGCAGAACAGAGAGATGCTGCGACATTTGAGGTTCTAAGTTCGCATCTGCAGCTGCAGAAGGAAGGATTTCTCAGCACATGGACAAATTCCTTTGTGGGTCCTTGGGATCCATCTCAGGGAATGCACAATCCTGATGAGAAAATTAAGCTTTGGCTTTTTCTTCCTGGGCGCCATTCCTCCGTTGCTGAGACTGCACTGCAAGCAGTATCCAGATTAAGAGTTGTTGCCTCTGGGTTCTGGGTTTCTCCTGGCGATTCAGAAGATGTTGCTACTGCTTTATCACAGGCTCTGAAAAACCGGATAGAAAGAGCACTTACAGGGCTCTCTTATGTGAGATTTGGAGATGTATTTTCAAGATATCGTCCATGTTCACAAAGTGAAGAACTCTTCAGGAAAGGTCATTCGGCAATTGAATTCGTCTTCGCTGCCACGGAAGAGGCCATATTTGTGCATGTTATATTATCGGCCAAGCATGTACGCACACTCTCTGGTGGTGATGTGGAAAGAGTGCTAAAAGCCTCCACGAGTGGTTTGGACCGGAGACTTCCAGTCATTGTTTCTCCTCATGGGATGCGTGGCAAAATCACTGGATGCTGTTTGAGCGATCTTGTGAAGCATGTGTACTCTGGGTCTGGCAAGTCAAGAAATTCTACCGGATTAGTAGGTTTACCATACCCTGTTTCTCAAGCTTCTGGTTGCACCTTGCGGGGACAGAATTGCTATATCGAAGTTACCCTTGGTTGCAGTGTTTCTGTTAATGATAAGCAAAATGAGCCTAACTCAAATCTAAACAAGCGCAACCATGCAACATCTGACACTCCTTTGGTTGTTAGAGGCGAGCAGAAAGGATCTATGGAGGACACATCTGTTTGCGAAAAGACATTTATATATCCTACTGAGGCAGTTCTTGTTCCTGTCTTGCAAACATCCAATGCACAGTCGTCCTTGAAGAGATTTTGGCGACAAAATTGGGGAGGGGTGTCATTGCCTAGTTCTACCGCCTTTATGCATTGCAGCGGCACTGAGGCAGATAATGTGGATGATTCGTGGTCAGAATCTGATGGGATTTGCATGCAGAATGGCCTTAAAAGTAGTAGCAATAGCAACAGTAGCTTAAGTAGCACTTCAAGTGATAGTGATTGTAAAACAAGAGCAACATCTGGTGACCTTGAAGCTGATGCTGATTCTTTAATTGGTAGACAATCTGCCTTACCATCTGTGAACACCATGGAGCTCAGTGGTCCTAAGCAGGGGGCAAAACGTGCCCGGACTGGAATAGAAGACTCATTTATTCAACCTGGTAGCATGATAATTGCTACGGCGCAAGATCACAGCAATTCAGGCATCACAGGGGTTGGAAATGATCAAGTTGGATCCTATTGGGACTGGGATGATGATGAGAGAGGTGTGGGCATGGATATTCAAGCACTTCTTTCTGAGTTTGGGGATTTTGGTGACTTCTTTGAAAATGATGCCTTGCCATTTGGAGAGCCCCCAGGAACTGCAGAGTCTCAGGCATTTGTTTTTTCTGGGCAAGACTGTGGAGATGGAAGTGGTAGTCCCACTGCTGGTGTGATGGATGTTTCAGATCCAATGCTTTTACCTGTTGGTTTTCCATCATTTGAAAGCTTCAATCGCTCACCAACAATCATGGATGAGGGCATCGGTACTGTTCAAGAAGCCACAAAAAGTACGTCGTCATCAGCTCCTGTGAGTTGTGTAGCAGCTTGTTTGAAAGGTGAGTTTGACCATGTAATGAAGGCTGAAGCATTGTTGACTTTTGCCCCAGAATACGGAGCAGTTGATACCCCTGCGTGTGAGCTCTCATCAACTATCTTTAGAAGTCCGTACCAGCCAAAATCTCAAAATACAGATAGTTTGAATTCAAGTGGGAACAATTATGTCTATGGGGCAACACCACCTTCATCGCCTACAACTAATGGAGCTGGTGAAAAGCCTGGTATGGTTGTTGATTCTGGAATACATGCCGGAAAACCTGATGTTGGTTATGTTTTCCAGAAATTTTATACTCAGGTGGAAAGCAGTGAAAGTATGGTGGATAGAAAGTCTGTTATGCACCATAAGCCAGTTAGTTCATCTGAGGGATCATCATTATCTTTGATTTCTGGTTTCAACTCTACAGCTACGGTTAAATCTGTCGAGAACATGACAAGTGAAGTTGTCAACAGTGCCAAGAGTCTCCTATGTCAAACAACTGTCCCTGCAGCTGAACTTGAATGCCTTATTTTCCAGGCTTCAATGTGCAGGATAAGGCATAACCTATCATCTATCGTTAGTAACACCTCTGCTGTGTGGAACAGATTGATGGGAAACACTGTATTAAGTCAAGTGCCCGGTGACCCGAGCAGCATGATAGACAATCTGTCTAGCAAATATGAAGTGAAGAAGGAGTCTATACCAGTTAGAATTGCCGGTGATATGGACGGAGGGATGCTGGATGGTCCTTTTAATGCACCAGTTGGTGTTTGGCGCTCTGTTATGGCGCCTAAATCTGCAAAACCTGTTAATACACCTACCACCGAGGTCTTTTCTTTGTCTCATTCATTTAATGAGGAAAACATGGCTTCATATGGGCAGAGACAGTCGATTCAAGATTTTATTGATTCCATACCATTGCTTGTTCAACAAGCTGCCTCATTTGTTGATGTGGCATTGGATGGTGAATGTGCTGATGGTCTGTATGGCTGGCTTGCTTCGCAAGAGCAGTGTAGGCGTGGATTTTGCTGTGGGCCACATATGGTTCATGCAGGTTGTGGGGGTGTTTTAGCTTCTTCCCATTCTCTTGACATTGCGGGTGTGCAGTTACATGATCCCATTACAACTAATATTCAGGCCTCATCCATGATTGGTTTATTGCACTCTGATGTGAAAACAGCATTGAAATCTGCATTTGGCTCTTTGGATGGTCCCTTATCTGTTGTTGATTGGTGCAAAGGTCGTCAATCAGGAGATGCAGGAACCATCAGTGAAGCATTATCTGCAGAATCCACTGTAAGCGAATATAGAGAGTCTTCTAATAGTGTGATAACAACTGTTGGGAATCCAACCAGTCCTTCACAACACTCTGGTGGTGTATCATCTGGTTTGAGAGATGGAAGTAAAGTGGACGACACCTGCCAAAGAAGGTCAAACCAGGAGCTCTGTATGTCAGAGTCAGATCAGCAGCTGGGGTCCCGGAGGAGGCCGAATCTGTTTGTAGTTCCATATCCTTCTATTCTTGTTGGGTACCAGGATGATTGGCTAAAGACATCAGCGAGTTCCTTACAGATGTGGGAGAAAGCTCCTCTTGAGCCTTATGCTTTCCAGAAACATATGTCTTATTATGTTGTTTGTCCAAATATCGATCCCCTTACTTCAGCTGCTGCTGATTTTTTTCAACAACTAGGAACTGTTTATCAGATGTGCAAATTGGGCACCCATTCACCTCAAAGCATAGGAAATCAAATGGAAATAGATTCTGGGAAGTGTTCCACTTCTGGCTTTGTTATGCTTGATAGCCCACATTCAATAAAGAGAGAAAGTAACACTGGTTCCCTTGTGGGATCAATAAGTGACTATTTTCTTTCTTTATCCACTGGTTGGGACCTACCTGGCTTTCTCAAGTCTCTTACAAAGGCTCTCAAAACCTTACAACTTGGTTCACGCTTGGCTACAAATGCAAAGGAAGGGCATAGCAGTCCATGTACTGTGATCTATATTGTGTGCCCCTTTCCTGATCCAACTGCTGTTCTTCGGACCATTGTCGAATCATCTGTTGCTGTTGGGTCGATATGTTCTTCATCTGAGAATGATAAGAGGTCATCACTGCAGAGTCAGGTGTGGAAAGCATTAAGTTATGCAGCAGGTGTTGATGAAGCATCTATATCAAATGTGCCAGCGCTTTCTGGGTTCAGTATTCCTAGATTAGTCCTGCAAATTGTTCCTGTAGATGCCATATTTCGGGTTACAAGTCCAAGTTTCAATGAACTTGTTGTGCTTAAGGAGATTGCTTTTACAGTTTACAACAAGGCTAGATGTATATCACGAGGATCCTCCAGTGATGTGGTTCAGTCATCAAGCTTCTCCGGTAGACCTCATTCTTTAATGATGCACATGACAAATCCAATTCCTGGTATGTGGAAAGACTGTGTTGGTTCCAGAATTTCAGGTCCTTCACTCCCAAGGGAAGGTGAGCTTGATCCAGGCTTGAGGACTGGAACGTGGGATAATACTTGGCAAACTACAAGGACGGGTAGTTTAGGTTGTGACACAAACCGAAGTGGGGAGTTGCTTTTGCAGGATGAGCTTCATTACATGTTTGAACCACTTTTTATTTTGGCTGAACCGGGATCAGTGGAGCAGGGAGTTTCACCTTCATTTATTGGTAATATAGCCATGGATTTCACGAAGCAAGCTTCTGATGATAACAGTGGTTTTTTGCATAGCTCCACTTCCACAGCATGTGGAGATGCTGGAACTGGCTCCCAATTTGATGGGTCAGAGGTAGATGGCTATGGGTCTGGCCAACAAACGCCGCCCTCTACCCTACATTGCTGCTATGGTTGGACAGAAGATTGGCGTTGGCTGGTGTGTATATGGACTGATTCGAGAGGAGAATTGCTGGACAGCCATATTTTTCCTTTTGGTGGCATTAGTAGTAGGCAGGACACAAAGGGCATGCAGAACCTTTTTGTCCAAGTTCTTCAGCAAGGTTTTCAAATACTGCAGGCTGCTGCTCCTGATAATGGTGTCTGTAGACCAAGAGATTTTGTTATTACACGCATTGGGTGCTTTTATGAGCTTGAATGCCAAGAGTGGCAAAAAGCACTGTATTCAATTGGTGGGTCCGAGGTAAAGAAGTGGCCAGTGCAACTACGCCGAGGTGCTCCGGATGGAATGGCCACAAGCAGCAATGGAGCTTCCTTGCAGCAGCAGGAAATAGAGAGAAGCTTACCTTCTTCTCCTGGTCCTTTGTACAGTGCCCACACAAAATCTTCTGGATTTATGAAAGGAGGATTGGGACAAACTAGTGGTAGAAAGCAGCTTCTAGGCGGAGCTGCAATTGTTGATGGCTCAAAGTCATTGCAGTGGGCACAAAGCATCAGCTTTGTTTCAATATTGGTCGATCATTCTTTGCATCTTGTTTGCCAAGCTGATGTCTCGACTGGTGTCACTCAAGGCGGTGGGTTTTTGAGCTCTTTGAATTACCTAGAAGGTTTCAGCCATGTCAAGTCCCTTGGGTCCACACCAGCATCATACGTTTTGATTCCTTCTCATAGCATGCGTTTCCTTACTCCCACTCCTCTTCAGCTTCCAACATGCCTGACTTCTGAATCGCCTCCTCTGGCTCATCTCCTTCACAGTAAAGGCTATGCAATTCCGTTCTCAACAGGTTTTGTGGTCTCTAAAGCAGTTCCATCACTTAATAAAGCTCACCACAATGTAAAAGATGAATGGCCTTCAGTTCTTTCAGTTAGTCTTGTTGATTATTATGGCGGATTTGGGTTTCCAAATGAAAAACATGGAAGGGCAATTCCAAAGCAGGGAGGAAGATGCATTGTTTCAGATGCCAGGGAGTATGAACTTGAGATTCATATGATTCTTGAATCTCTTGTTGCAGAGCTACATGCTCTGTCATGGATGACTGTGAGCCCTGCATATATGGAGAGACGTAGTGCACTGCCTTTTCACTGTGACATGGTATTAAGGTTGAGAAGACTGCTTCATTTTGCTGAGAAGGAGATCTCTTGTCAGCCTGACAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_12051.p1 GENE.S_Transcript_12051~~S_Transcript_12051.p1 ORF type:complete len:1957 (+),score=437.64,Med13_C|PF06333.8|1.8e+02,Med13_C|PF06333.8|0.0067,Med13_C|PF06333.8|7.1e-12 S_Transcript_12051:105-5975(+)
MWTNIFRIGGLNQLSWFQFLPNDSDLSSLPDKSVKAEQRDAATFEVLSSHLQLQKEGFLSTWTNSFVGPWDPSQGMHNPDEKIKLWLFLPGRHSSVAETALQAVSRLRVVASGFWVSPGDSEDVATALSQALKNRIERALTGLSYVRFGDVFSRYRPCSQSEELFRKGHSAIEFVFAATEEAIFVHVILSAKHVRTLSGGDVERVLKASTSGLDRRLPVIVSPHGMRGKITGCCLSDLVKHVYSGSGKSRNSTGLVGLPYPVSQASGCTLRGQNCYIEVTLGCSVSVNDKQNEPNSNLNKRNHATSDTPLVVRGEQKGSMEDTSVCEKTFIYPTEAVLVPVLQTSNAQSSLKRFWRQNWGGVSLPSSTAFMHCSGTEADNVDDSWSESDGICMQNGLKSSSNSNSSLSSTSSDSDCKTRATSGDLEADADSLIGRQSALPSVNTMELSGPKQGAKRARTGIEDSFIQPGSMIIATAQDHSNSGITGVGNDQVGSYWDWDDDERGVGMDIQALLSEFGDFGDFFENDALPFGEPPGTAESQAFVFSGQDCGDGSGSPTAGVMDVSDPMLLPVGFPSFESFNRSPTIMDEGIGTVQEATKSTSSSAPVSCVAACLKGEFDHVMKAEALLTFAPEYGAVDTPACELSSTIFRSPYQPKSQNTDSLNSSGNNYVYGATPPSSPTTNGAGEKPGMVVDSGIHAGKPDVGYVFQKFYTQVESSESMVDRKSVMHHKPVSSSEGSSLSLISGFNSTATVKSVENMTSEVVNSAKSLLCQTTVPAAELECLIFQASMCRIRHNLSSIVSNTSAVWNRLMGNTVLSQVPGDPSSMIDNLSSKYEVKKESIPVRIAGDMDGGMLDGPFNAPVGVWRSVMAPKSAKPVNTPTTEVFSLSHSFNEENMASYGQRQSIQDFIDSIPLLVQQAASFVDVALDGECADGLYGWLASQEQCRRGFCCGPHMVHAGCGGVLASSHSLDIAGVQLHDPITTNIQASSMIGLLHSDVKTALKSAFGSLDGPLSVVDWCKGRQSGDAGTISEALSAESTVSEYRESSNSVITTVGNPTSPSQHSGGVSSGLRDGSKVDDTCQRRSNQELCMSESDQQLGSRRRPNLFVVPYPSILVGYQDDWLKTSASSLQMWEKAPLEPYAFQKHMSYYVVCPNIDPLTSAAADFFQQLGTVYQMCKLGTHSPQSIGNQMEIDSGKCSTSGFVMLDSPHSIKRESNTGSLVGSISDYFLSLSTGWDLPGFLKSLTKALKTLQLGSRLATNAKEGHSSPCTVIYIVCPFPDPTAVLRTIVESSVAVGSICSSSENDKRSSLQSQVWKALSYAAGVDEASISNVPALSGFSIPRLVLQIVPVDAIFRVTSPSFNELVVLKEIAFTVYNKARCISRGSSSDVVQSSSFSGRPHSLMMHMTNPIPGMWKDCVGSRISGPSLPREGELDPGLRTGTWDNTWQTTRTGSLGCDTNRSGELLLQDELHYMFEPLFILAEPGSVEQGVSPSFIGNIAMDFTKQASDDNSGFLHSSTSTACGDAGTGSQFDGSEVDGYGSGQQTPPSTLHCCYGWTEDWRWLVCIWTDSRGELLDSHIFPFGGISSRQDTKGMQNLFVQVLQQGFQILQAAAPDNGVCRPRDFVITRIGCFYELECQEWQKALYSIGGSEVKKWPVQLRRGAPDGMATSSNGASLQQQEIERSLPSSPGPLYSAHTKSSGFMKGGLGQTSGRKQLLGGAAIVDGSKSLQWAQSISFVSILVDHSLHLVCQADVSTGVTQGGGFLSSLNYLEGFSHVKSLGSTPASYVLIPSHSMRFLTPTPLQLPTCLTSESPPLAHLLHSKGYAIPFSTGFVVSKAVPSLNKAHHNVKDEWPSVLSVSLVDYYGGFGFPNEKHGRAIPKQGGRCIVSDAREYELEIHMILESLVAELHALSWMTVSPAYMERRSALPFHCDMVLRLRRLLHFAEKEISCQPDK*

Click here to download the sequence:
Link to NCBI Protein BLAST