Transcript Information: S_Transcript_120518.p1


Annotated TAIR IDAT3G20820.1
Annotated Gene NameLeucine-rich repeat (LRR) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:7280930-7282027 | Forward length=365
E-Value1.1E-170
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.6973401761069
Replicate 27.9184258411902
Replicate 36.2149494199531
Condition 2: 8 Hour
Replicate 16.0178498703142
Replicate 23.9840278399513
Replicate 35.5479603355431
Condition 3: 24 Hour
Replicate 11.5560738924807
Replicate 23.0425390883316
Replicate 34.3533939658146


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_120518.p1 GENE.S_Transcript_120518~~S_Transcript_120518.p1 ORF type:complete len:365 (+),score=8.40,LRR_8|PF13855.2|5.7,LRR_8|PF13855.2|4.1e-09,LRR_8|PF13855.2|0.00011,LRR_8|PF13855.2|0.00015,LRR_1|PF00560.29|6.9e+02,LRR_1|PF00560.29|2.4,LRR_1|PF00560.29|0.076,LRR_1|PF00560.29|5.5e+02,LRR_1|PF00560.29|13,LRR_1|PF00560.29|83,LRR_1|PF00560.29|5.4,LRR_1|PF00560.29|13,LRRNT_2|PF08263.8|8.4e-10,LRR_4|PF12799.3|1e+02,LRR_4|PF12799.3|0.0027,LRR_4|PF12799.3|3.9,LRR_4|PF12799.3|0.71,LRR_4|PF12799.3|1e+02 S_Transcript_120518:105-1199(+)
ATGGGAGTTAAGTGTTTAGTTTTGGCTATCTTACTGACCGTTACAACGGTCGTTAATGGCTGCCCGCCATCAGACCGGGCTGCCCTTTTATCCATCAAGGCTGCTCTTCATGAACCGTATTTGGGTATTTTCAAGTCCTGGACCGGAGCCAATTGCTGTCTTGAGTGGTATGGGGTACATTGCGATCCGAGAACCAACCGGGTCGTTGAAATTAACCTAAGAGGCGAGTCAGAAGACCCGATTTTCCAAAAGGCCGGTCGAACCGGGTACATGACCGGTTCAATCTCCCCAGCGGTTTGCAAACTGGACCGGCTCAGCAGCCTTGTCATCGCCGACTGGAAGGGCATCTCGGGCGAGATCCCGACTTGCATTTCTCTGCTCCCGAGCCTCCGGCTCATGGAACTTGTCGGGAACCGGATCTCAGGGAAAATCCCGGCTTATATCGGCCGGTTGAGGGACCTCATGGTTCTTAACTTGGCTGATAATAGCCTCACCGGTCCTATTCCCCGGTCTATTGTCTCGTTAAACCGGTTGAAACACTTGGACCTAAGAAATAACAAGCTCTCAGGCGAGCTCCCTAGAGACATGGGCCGGCTTAAAATGATAAGTCGGGCTTTGCTTAGTGGAAACCAACTAAGTGGACCGCTTCCGGTCTCAATTTCCAACATTTATCGACTCTCGGATTTGGGTCTTTCCCTGAACCGGTTATCCGGCCCAATACCTGATATGTTTGAGAAAATGCCTGTTTTGGCAACCTTGAACTTGGATGGTAACCGGATCTCGGGTCAAATACCAAAGAGCTTGTTGAATTCGGGTGTGAGTATATTGAACTTGAGCCGAAACGCCCTCGAAGGCCGGATCCCGGATGTTTTTGGACCGAGATCATATTTCACGGTTCTAGACTTATCTCACAATCGGTTTAGTGGGCCGTTACCCAAGTCCATTAGCACGGCCTCCTATATTGGGCATATGGACTTGAGCCACAACCAGCTTTGTGGGCCCATACCAAATGTGGAACCCTATGAGCACCTTGAAGCTTCATCTTTTGTTCACAATTCTTGTCTTTGTGGCAAGCCATTAAGTAATAAATGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_120518.p1 GENE.S_Transcript_120518~~S_Transcript_120518.p1 ORF type:complete len:365 (+),score=8.40,LRR_8|PF13855.2|5.7,LRR_8|PF13855.2|4.1e-09,LRR_8|PF13855.2|0.00011,LRR_8|PF13855.2|0.00015,LRR_1|PF00560.29|6.9e+02,LRR_1|PF00560.29|2.4,LRR_1|PF00560.29|0.076,LRR_1|PF00560.29|5.5e+02,LRR_1|PF00560.29|13,LRR_1|PF00560.29|83,LRR_1|PF00560.29|5.4,LRR_1|PF00560.29|13,LRRNT_2|PF08263.8|8.4e-10,LRR_4|PF12799.3|1e+02,LRR_4|PF12799.3|0.0027,LRR_4|PF12799.3|3.9,LRR_4|PF12799.3|0.71,LRR_4|PF12799.3|1e+02 S_Transcript_120518:105-1199(+)
MGVKCLVLAILLTVTTVVNGCPPSDRAALLSIKAALHEPYLGIFKSWTGANCCLEWYGVHCDPRTNRVVEINLRGESEDPIFQKAGRTGYMTGSISPAVCKLDRLSSLVIADWKGISGEIPTCISLLPSLRLMELVGNRISGKIPAYIGRLRDLMVLNLADNSLTGPIPRSIVSLNRLKHLDLRNNKLSGELPRDMGRLKMISRALLSGNQLSGPLPVSISNIYRLSDLGLSLNRLSGPIPDMFEKMPVLATLNLDGNRISGQIPKSLLNSGVSILNLSRNALEGRIPDVFGPRSYFTVLDLSHNRFSGPLPKSISTASYIGHMDLSHNQLCGPIPNVEPYEHLEASSFVHNSCLCGKPLSNKC*

Click here to download the sequence:
Link to NCBI Protein BLAST