Transcript Information: S_Transcript_120550.p1


Annotated TAIR IDAT3G23290.2
Annotated Gene NameProtein of unknown function (DUF640)
Annotated Gene Symbol(s)LSH4
Annotation TypeOrtholog
Chromosome Positionchr3:8326958-8328010 | Forward length=195
E-Value7.4E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.3415175821188
Replicate 22.4345147097947
Replicate 30.38157385000553
Condition 2: 8 Hour
Replicate 12.0590032030335
Replicate 20.7714430565423
Replicate 33.3811344476867
Condition 3: 24 Hour
Replicate 10.75327184450325
Replicate 21.7193236368264
Replicate 31.5655062044555


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_120550.p1 GENE.S_Transcript_120550~~S_Transcript_120550.p1 ORF type:5prime_partial len:145 (+),score=9.11,DUF640|PF04852.8|4.3e-40 S_Transcript_120550:2-436(+)
CTGGACCAGTTCGGAAAGACCAAAGTTCACAACCCGCCTTGCCCCTTCTTCGGGCACCCGAACCCGCCTGCCCCCTGCCCGTGCCCGCTTCGGCAGGCTTGGGGCTCCCTCGACGCTCTCATAGGCCGCCTTCGTGCTGCCTACGAGGAGCACGGTGGGGCCCCAGAGAGCAACCCTTTCGGAGCTAGAGCCGTCCGACTCTACCTCCGCGAGGTCAGAGACTCGCAGTCCAAGGCCAGAGGGGTCTCCTACGAGAAGAAGAAGCGGAAGCGACCGACCGCTTCCTCCCTCGCTCCGCCGCCTCAACAGCACCACCACCACCTCGGCCTCCATGGCGAGACCAGCGGCGGCGGAGGACTCGGGACTGGTCTCGCCATGGAATATCCAAGTCCTGGTAGTGGTAGTGGTGGTACTGGGGATCGAAATTTCCGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_120550.p1 GENE.S_Transcript_120550~~S_Transcript_120550.p1 ORF type:5prime_partial len:145 (+),score=9.11,DUF640|PF04852.8|4.3e-40 S_Transcript_120550:2-436(+)
LDQFGKTKVHNPPCPFFGHPNPPAPCPCPLRQAWGSLDALIGRLRAAYEEHGGAPESNPFGARAVRLYLREVRDSQSKARGVSYEKKKRKRPTASSLAPPPQQHHHHLGLHGETSGGGGLGTGLAMEYPSPGSGSGGTGDRNFR*

Click here to download the sequence:
Link to NCBI Protein BLAST