Transcript Information: S_Transcript_120554.p1


Annotated TAIR IDAT2G42610.1
Annotated Gene NameProtein of unknown function (DUF640)
Annotated Gene Symbol(s)LSH10
Annotation TypeOrtholog
Chromosome Positionchr2:17748005-17748538 | Forward length=177
E-Value4.5E-88
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.637150679349
Replicate 21.1031394778757
Replicate 30.083830618561821
Condition 2: 8 Hour
Replicate 11.6478710699603
Replicate 20.40676088435867
Replicate 33.6818282226786
Condition 3: 24 Hour
Replicate 10.49647462478623
Replicate 20.72112127742924
Replicate 31.031810907482


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_120554.p1 GENE.S_Transcript_120554~~S_Transcript_120554.p1 ORF type:5prime_partial len:220 (+),score=24.70,DUF640|PF04852.8|7.2e-58 S_Transcript_120554:3-662(+)
TCATCCTTCCTTCACCATTTTCTTTCTCCTTACTTCAAAAAGGCAAAAAAAAAAAAAAAAAAAAAACCCAAAAAATCACCATCCATGTCAAACACAACTCATTTCTCAGGACAGCTGTCTGGATTGCTGCCGAACCATAAGGTCCGACAGTGCATCCAGACGGATCAGCCCAACTCCAATCCTGTCGCTCAGCTGAGTCGGTATGAGTCTCAGAAGCGACGGGACTGGAACACCTTTGGGCAGTACCTGAGGAACATGAGGCCGCCGGTGGCCGTGTCCCAGTGCACGTGCCATCACGTGCTGGATTTCCTCAGGTACCTTGATCAGTTTGGAAAGACTAAGGTTCATGTGAAAGGATGTGTGTTTTTCGGGCAACCCGACCCGCCTGCCCCTTGCACGTGCCCACTCCGACAGGCTTGGGGCAGCCTTGACGCCTTGGTGGGCCGCCTTCGGGCTGCCTACGAGGAGCATGGTGGGTCACCCGAGACCAACCCGTTTGGAAACGGGGCGATCCGGGTCTTCCTAAGGGAGGTAAAGGAGTGTCAATCTAAAGCTAGGGGAATTCCGTACAAGAAGAGAAAGAAGAAGAAGACTCAACAAATGATCATCAAACAAGAACAACAAGCAATTGAGGCTACTTCTTCTTCTTGTCCTCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_120554.p1 GENE.S_Transcript_120554~~S_Transcript_120554.p1 ORF type:5prime_partial len:220 (+),score=24.70,DUF640|PF04852.8|7.2e-58 S_Transcript_120554:3-662(+)
SSFLHHFLSPYFKKAKKKKKKKPKKSPSMSNTTHFSGQLSGLLPNHKVRQCIQTDQPNSNPVAQLSRYESQKRRDWNTFGQYLRNMRPPVAVSQCTCHHVLDFLRYLDQFGKTKVHVKGCVFFGQPDPPAPCTCPLRQAWGSLDALVGRLRAAYEEHGGSPETNPFGNGAIRVFLREVKECQSKARGIPYKKRKKKKTQQMIIKQEQQAIEATSSSCPQ*

Click here to download the sequence:
Link to NCBI Protein BLAST