Transcript Information: S_Transcript_120572.p1


Annotated TAIR IDAT5G45410.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G25030.2); Has 124 Blast hits to 124 proteins in 34 species: Archae - 2; Bacteria - 31; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:18402071-18403282 | Reverse length=342
E-Value4.9E-130
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0035342921729
Replicate 24.6289776455821
Replicate 34.4724891319903
Condition 2: 8 Hour
Replicate 12.9053665282198
Replicate 23.8403990852937
Replicate 32.6717411167007
Condition 3: 24 Hour
Replicate 15.4761015834732
Replicate 23.7670095535618
Replicate 33.7798704149357


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_120572.p1 GENE.S_Transcript_120572~~S_Transcript_120572.p1 ORF type:complete len:367 (+),score=68.02 S_Transcript_120572:270-1370(+)
ATGGACTTCTTCCTTAACGAAATGCAAGAAGAGACATTTCAGTGCCCCTTTGATGAGCAAGATATCCAACGATGTCCCTTCTTGAGGAACATCAGCAAACCCACAAACCTGTCTTTTTCGTCCATGAGTCTTTCACTACCCGGTGGGTGCATACCTTTAACTGGAGGGAAAGGTCCAATATTCGAAGATGGTCCCAACTTTGATTTCGCATGCAAACTTTTCCATGGTAAAGATGGGGTCGTACCTCTCACAAGGATGTCAGCCCATTGTGATGATTATCATTTGGAAACTGAGTCTGCTCTTAAGTTTAATCCATTAGCTACGAAAGCAGCCACAATAAGTTTGTCAGCCTTTGGACTTGGTGGTCCATTCGAATTCAATTTTTTCTCTGACAAATCAAAGAAGCAAAAGCAGAAGTCTGGATCATCAGGGGGAAACCACCATTCTTCTAAGGGAGGAAATGCATCAGGACACGAAGCATTGAGCAATGAGTGGCTACAAACTGGGAACTGTCCTATCGCAAAGTCCTACAGGGCTGTCCGTCATGTGCTTCCTCTAGTTGCCAAGGCTTTTCAACCACCACCCGGTGTTAAGCTCCACTGCCCTCTAGCTGTAGTAGCTGCGAGGGCTGCCCTTGCTTGGACTGCAATGGTTAAAAACCTCCGCCCCCAGCCGCTACCTGCTAAGATGCTTGTGATCGCAGCACTAGGAATGGCAGCTAATGTGCCCTTGGGGATCTGGAGAGAACACACTCAGAAATTCTCACTGTCATGGTTCGTCGCAGTTCATGCAGCTGTTCCCTTCATAGCCATGCTTCGCAAAGCTGTTGTGATGCCGAAAACTGCCATGGCTTTAACCATTAGTGCCTCTATTCTGGGCCAGGCGATTGGCTCGAGAGCTGAACGTATGCGGCTGAGAGCACTATCTGAAAAGCAAACTGCAACTCTAGAGAAAACAGCTGCCCGTGACTATGCAGGGTATGGTTCTGACCAAGTTGAGGATGTTGTTAACATCCACTGTGGAACTCAGCAAATGAGGTTGGAAACACTTCCCAGCAAGGGAAATGAGGCTGGCTCTTCTGGCGCTAATGTTTGTTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_120572.p1 GENE.S_Transcript_120572~~S_Transcript_120572.p1 ORF type:complete len:367 (+),score=68.02 S_Transcript_120572:270-1370(+)
MDFFLNEMQEETFQCPFDEQDIQRCPFLRNISKPTNLSFSSMSLSLPGGCIPLTGGKGPIFEDGPNFDFACKLFHGKDGVVPLTRMSAHCDDYHLETESALKFNPLATKAATISLSAFGLGGPFEFNFFSDKSKKQKQKSGSSGGNHHSSKGGNASGHEALSNEWLQTGNCPIAKSYRAVRHVLPLVAKAFQPPPGVKLHCPLAVVAARAALAWTAMVKNLRPQPLPAKMLVIAALGMAANVPLGIWREHTQKFSLSWFVAVHAAVPFIAMLRKAVVMPKTAMALTISASILGQAIGSRAERMRLRALSEKQTATLEKTAARDYAGYGSDQVEDVVNIHCGTQQMRLETLPSKGNEAGSSGANVCF*

Click here to download the sequence:
Link to NCBI Protein BLAST