Transcript Information: S_Transcript_120605.p1


Annotated TAIR IDAT4G32770.1
Annotated Gene Nametocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1)
Annotated Gene Symbol(s)VTE1, ATSDX1
Annotation TypeOrtholog
Chromosome Positionchr4:15804981-15807790 | Forward length=488
E-Value1.9E-162
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.168770081514
Replicate 210.498279045955
Replicate 310.14693286384
Condition 2: 8 Hour
Replicate 112.287864309129
Replicate 210.894840787376
Replicate 312.995535342814
Condition 3: 24 Hour
Replicate 110.881837872638
Replicate 213.648838198395
Replicate 310.970182882523


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_120605.p1 GENE.S_Transcript_120605~~S_Transcript_120605.p1 ORF type:complete len:269 (+),score=64.29,Tocopherol_cycl|PF14249.2|1.7e-104 S_Transcript_120605:1344-2150(+)
ATGTATGTTGTTGAGAATCCTGCATTGAAAAAGAAATTGACACCTGCAGAAGAAGCCAAATATGGTCGCCGTTTCGCTGGAACTGGGGCTCAGATTCTAGGTGCTGATGACAAGTACATTTGCCAATACTGTGAAGAATCACATAACTTTTGGGGAAGCAGGCATGAACTAAGTCTTGGAAACACCTTCAAGGCTAGTGAAGGTTCACAGCCTCCAAACAAAGAGGTTCCTCCAGAGGAGTTTAATAGAAGAGTTACAGAAGGTTATCAAGTGACCCCACTTTGGCATCAAGGATTTATTCGTGATGATGGCAGGTCAGATTTTGCTGAGATAGTGAAAACAGCTCGTTGGGAGTATAGTACCCGACCTGTATTTGGCTGGGGTAATGTCAGTTCTAAACAGAAATCAACTGCAGGTTGGTTTGCAGCTTTACCTGTTTTTGAACCTCACTGGCAAATATGCATGGGAGGGGGACTATCAACAGGTTGGATAGAGTGGGATGGTGAGAGGTTTGAGTTTGAGAATGCTCCTTCTTATTCGGAAAAGAACTGGGGAGGAGGCTTTCCCAGAAAGTGGTTTTGGGTCCAATGTAATGTCTTTGAGGGTGTGACAGGAGACATTGCTTTGACTGCAGGTGGAGGGTTGAGAGAGCTTCCCAGAAATAAAATTGAAAATGCAGCATTGGTCGGAGTCCACTACTCTGGGGTATTCTATGAATTTGTGCCGTGGAATGGGGATGTTGAGTGGGAGATCACTCCATGGGGTTACTGGAAAATCTGTGCGGATAATGGTTCATACAAGGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_120605.p1 GENE.S_Transcript_120605~~S_Transcript_120605.p1 ORF type:complete len:269 (+),score=64.29,Tocopherol_cycl|PF14249.2|1.7e-104 S_Transcript_120605:1344-2150(+)
MYVVENPALKKKLTPAEEAKYGRRFAGTGAQILGADDKYICQYCEESHNFWGSRHELSLGNTFKASEGSQPPNKEVPPEEFNRRVTEGYQVTPLWHQGFIRDDGRSDFAEIVKTARWEYSTRPVFGWGNVSSKQKSTAGWFAALPVFEPHWQICMGGGLSTGWIEWDGERFEFENAPSYSEKNWGGGFPRKWFWVQCNVFEGVTGDIALTAGGGLRELPRNKIENAALVGVHYSGVFYEFVPWNGDVEWEITPWGYWKICADNGSYKV*

Click here to download the sequence:
Link to NCBI Protein BLAST