Transcript Information: S_Transcript_120607.p1


Annotated TAIR IDAT4G32770.1
Annotated Gene Nametocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1)
Annotated Gene Symbol(s)VTE1, ATSDX1
Annotation TypeOrtholog
Chromosome Positionchr4:15804981-15807790 | Forward length=488
E-Value3.3E-159
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.1326116839225
Replicate 211.770764401999
Replicate 310.284421194072
Condition 2: 8 Hour
Replicate 113.549912882468
Replicate 213.135214080697
Replicate 315.944025420348
Condition 3: 24 Hour
Replicate 115.754084876595
Replicate 214.582613346712
Replicate 315.214369949467


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_120607.p1 GENE.S_Transcript_120607~~S_Transcript_120607.p1 ORF type:internal len:373 (+),score=77.55,Tocopherol_cycl|PF14249.2|2.8e-90 S_Transcript_120607:3-1118(+)
GAGACTCAATTTTTGGGAGTGGGGACTGAACTTAAGCTCTCTCTATCAAACTCATCTTCTTCAAGCACAAAGCTTTTAGCTTTGCTAAAAAATGGCAGCCACAACACCAGTCCACCACAAATCATATCATCGTCTAGTCCACCCTACTCTGTGGCGCTTTGCACACCAACTCACTTCCCATTGGGACTATCATCATCATCATCAACATCTCCGTTGAAGAACAAATTACCCTTTTGCAATCCTTCAAATTTGGGCCTTCAATTAACTACCAGGAAACCCAATTTCTTCTCTCAATCTTCAATGGAGTCAACTGGGTCTTCTTCAGATTCTTCTGTGGCTGTTGAGGAGAAGAAAAATGGTTCTATAACACCCATTTATGAGCCCACACCTCCTAAACGACCACTTCGGACACCTCATAGCGGGTACCATTTTGATGGGAACACCAGGCAATTTTTTGAGGGGTGGTATTTTAAGGTCTCAATTCCGGAGAAGAAGCAAAGTTTTTGCTTCATGTATGTTGTTGAGAATCCTGCATTCAAAAAGAAATTGACCCCTGGTGAAGAAGCCAAATATGGTAGCCGCTTCGCTGGAACTGGGGCTCAGATTCTAGGTGCTGATGACAAGTACATTTGCCAATACTGTGAAGAATCACATAACTTTTGGGGAAGCAGGCATGAACTGAGTCTGGGAAACACCTTCAAGGCTAGTGAAGGTTCGCAACCTCCAAACAAAGAGGTTCCTCCAGAGGAGTTTAATAGAAGAGTTACAGAAGGTTATCAAGTGACCCCACTTTGGCATCAAGGATTTATTCGTGATGATGGCAGGTCAGATTTTGCTGAGATAGTGAAAACAGCTCGTTGGGAGTATAGTACCCGACCTGTATTTGGCTGGGGTAATGTCAGTTCTAAACAGAAATCAACTGCAGGTTGGTTTGCAGCTTTACCTGTTTTTGAACCTCACTGGCAAATATGCATGGGAGGGGGACTATCAACAGGTTGGATAGAGTGGGATGGTGAGAGGTTTGAGTTTGAGAATGCTCCTTCTTATTCGGAAAAGAACTGGGGAGGAGGCTTTCCCAGAAAGTGGTTTTGGGTCCAATGTAATGTCTTTGAGGGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_120607.p1 GENE.S_Transcript_120607~~S_Transcript_120607.p1 ORF type:internal len:373 (+),score=77.55,Tocopherol_cycl|PF14249.2|2.8e-90 S_Transcript_120607:3-1118(+)
ETQFLGVGTELKLSLSNSSSSSTKLLALLKNGSHNTSPPQIISSSSPPYSVALCTPTHFPLGLSSSSSTSPLKNKLPFCNPSNLGLQLTTRKPNFFSQSSMESTGSSSDSSVAVEEKKNGSITPIYEPTPPKRPLRTPHSGYHFDGNTRQFFEGWYFKVSIPEKKQSFCFMYVVENPAFKKKLTPGEEAKYGSRFAGTGAQILGADDKYICQYCEESHNFWGSRHELSLGNTFKASEGSQPPNKEVPPEEFNRRVTEGYQVTPLWHQGFIRDDGRSDFAEIVKTARWEYSTRPVFGWGNVSSKQKSTAGWFAALPVFEPHWQICMGGGLSTGWIEWDGERFEFENAPSYSEKNWGGGFPRKWFWVQCNVFEG

Click here to download the sequence:
Link to NCBI Protein BLAST